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5I1R
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Quantitative characterization of configurational space sampled by HIV-1 nucleocapsid using solution NMR and X-ray scattering
Descriptor: Nucleocapsid protein p7, ZINC ION
Authors:Deshmukh, L, Schwieters, C.D, Grishaev, A, Clore, G.M.
Deposit date:2016-02-05
Release date:2016-03-30
Last modified:2023-06-14
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Quantitative Characterization of Configurational Space Sampled by HIV-1 Nucleocapsid Using Solution NMR, X-ray Scattering and Protein Engineering.
Chemphyschem, 17, 2016
2ZNF
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BU of 2znf by Molmil
HIGH-RESOLUTION STRUCTURE OF AN HIV ZINC FINGERLIKE DOMAIN VIA A NEW NMR-BASED DISTANCE GEOMETRY APPROACH
Descriptor: GAG POLYPROTEIN, ZINC ION
Authors:Summers, M.F, South, T.L, Kim, B, Hare, D.R.
Deposit date:1990-03-30
Release date:1991-10-15
Last modified:2022-03-23
Method:SOLUTION NMR
Cite:High-resolution structure of an HIV zinc fingerlike domain via a new NMR-based distance geometry approach.
Biochemistry, 29, 1990
1NCP
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BU of 1ncp by Molmil
STRUCTURAL CHARACTERIZATION OF A 39 RESIDUE SYNTHETIC PEPTIDE CONTAINING THE TWO ZINC BINDING DOMAINS FROM THE HIV-1 P7 NUCLEOCAPSID PROTEIN BY CD AND NMR SPECTROSCOPY
Descriptor: HIV-1 P7 NUCLEOCAPSID PROTEIN, ZINC ION
Authors:Clore, G.M, Omichinski, J.G, Gronenborn, A.M.
Deposit date:1991-11-27
Release date:1993-10-31
Last modified:2018-07-04
Method:SOLUTION NMR
Cite:Structural characterization of a 39-residue synthetic peptide containing the two zinc binding domains from the HIV-1 p7 nucleocapsid protein by CD and NMR spectroscopy.
FEBS Lett., 292, 1991
1NC8
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BU of 1nc8 by Molmil
HIGH-RESOLUTION SOLUTION NMR STRUCTURE OF THE MINIMAL ACTIVE DOMAIN OF THE HUMAN IMMUNODEFICIENCY VIRUS TYPE-2 NUCLEOCAPSID PROTEIN, 15 STRUCTURES
Descriptor: NUCLEOCAPSID PROTEIN, ZINC ION
Authors:Kodera, Y, Sato, K, Tsukahara, T, Komatsu, H, Maeda, T, Kohno, T.
Deposit date:1998-05-14
Release date:1999-05-25
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:High-resolution solution NMR structure of the minimal active domain of the human immunodeficiency virus type-2 nucleocapsid protein.
Biochemistry, 37, 1998
1A6B
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BU of 1a6b by Molmil
NMR STRUCTURE OF THE COMPLEX BETWEEN THE ZINC FINGER PROTEIN NCP10 OF MOLONEY MURINE LEUKEMIA VIRUS AND A SEQUENCE OF THE PSI-PACKAGING DOMAIN OF HIV-1, 20 STRUCTURES
Descriptor: DNA (5'-D(*AP*CP*GP*CP*C)-3'), ZINC FINGER PROTEIN NCP10, ZINC ION
Authors:Schueler, W, Dong, C.-Z, Wecker, K, Roques, B.P.
Deposit date:1998-02-23
Release date:1999-08-23
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:NMR structure of the complex between the zinc finger protein NCp10 of Moloney murine leukemia virus and the single-stranded pentanucleotide d(ACGCC): comparison with HIV-NCp7 complexes.
Biochemistry, 38, 1999
1AAF
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BU of 1aaf by Molmil
NUCLEOCAPSID ZINC FINGERS DETECTED IN RETROVIRUSES: EXAFS STUDIES ON INTACT VIRUSES AND THE SOLUTION-STATE STRUCTURE OF THE NUCLEOCAPSID PROTEIN FROM HIV-1
Descriptor: HIV-1 NUCLEOCAPSID PROTEIN, ZINC ION
Authors:Summers, M.F, Henderson, L.E, Chance, M.R, Bess Junior, J.W, South, T.L, Blake, P.R, Sagi, I, Perez-Alvarado, G, Sowder, R.C, Hare, D.R, Arthur, L.O.
Deposit date:1992-04-06
Release date:1994-01-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Nucleocapsid zinc fingers detected in retroviruses: EXAFS studies of intact viruses and the solution-state structure of the nucleocapsid protein from HIV-1.
Protein Sci., 1, 1992
1A1T
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BU of 1a1t by Molmil
STRUCTURE OF THE HIV-1 NUCLEOCAPSID PROTEIN BOUND TO THE SL3 PSI-RNA RECOGNITION ELEMENT, NMR, 25 STRUCTURES
Descriptor: NUCLEOCAPSID PROTEIN, SL3 STEM-LOOP RNA, ZINC ION
Authors:De Guzman, R.N, Wu, Z.R, Stalling, C.C, Pappalardo, L, Borer, P.N, Summers, M.F.
Deposit date:1997-12-15
Release date:1998-06-17
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Structure of the HIV-1 nucleocapsid protein bound to the SL3 psi-RNA recognition element.
Science, 279, 1998
1HVO
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BU of 1hvo by Molmil
ZINC-AND SEQUENCE-DEPENDENT BINDING TO NUCLEIC ACIDS BY THE N-TERMINAL ZINC FINGER DOMAIN OF THE HIV-1 NUCLEOCAPSID PROTEIN: NMR STRUCTURE OF THE COMPLEX WITH THE PSI-SITE ANALOG, D/ACGCC
Descriptor: DNA (5'-D(P*AP*CP*GP*CP*C)-3'), Hiv-1 Nucleocapsid Zinc Finger, ZINC ION
Authors:South, T.L, Summers, M.F.
Deposit date:1992-12-08
Release date:1994-01-31
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Zinc- and sequence-dependent binding to nucleic acids by the N-terminal zinc finger of the HIV-1 nucleocapsid protein: NMR structure of the complex with the Psi-site analog, dACGCC.
Protein Sci., 2, 1993
1HVN
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BU of 1hvn by Molmil
ZINC-AND SEQUENCE-DEPENDENT BINDING TO NUCLEIC ACIDS BY THE N-TERMINAL ZINC FINGER DOMAIN OF THE HIV-1 NUCLEOCAPSID PROTEIN: NMR STRUCTURE OF THE COMPLEX WITH THE PSI-SITE ANALOG, D/ACGCC
Descriptor: DNA (5'-D(P*AP*CP*GP*CP*C)-3'), Hiv-1 Nucleocapsid Zinc Finger, ZINC ION
Authors:South, T.L, Summers, M.F.
Deposit date:1992-12-08
Release date:1994-01-31
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Zinc- and sequence-dependent binding to nucleic acids by the N-terminal zinc finger of the HIV-1 nucleocapsid protein: NMR structure of the complex with the Psi-site analog, dACGCC.
Protein Sci., 2, 1993
1MFS
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BU of 1mfs by Molmil
DYNAMICAL BEHAVIOR OF THE HIV-1 NUCLEOCAPSID PROTEIN; NMR, 30 STRUCTURES
Descriptor: HIV-1 NUCLEOCAPSID PROTEIN, ZINC ION
Authors:Summers, M.F, Turner, B.G, De Guzman, R.N, Lee, B.M, Tjandra, N.
Deposit date:1998-04-01
Release date:1998-06-17
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Dynamical behavior of the HIV-1 nucleocapsid protein.
J.Mol.Biol., 279, 1998
1BJ6
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BU of 1bj6 by Molmil
1H NMR OF (12-53) NCP7/D(ACGCC) COMPLEX, 10 STRUCTURES
Descriptor: DNA (5'-D(*AP*CP*GP*CP*C)-3'), NUCLEOCAPSID PROTEIN 7, ZINC ION
Authors:Demene, H, Morellet, N, Teilleux, V, Huynh-Dinh, T, De Rocquigny, H, Fournie-Zaluski, M.C, Roques, B.P.
Deposit date:1998-07-03
Release date:1999-02-02
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Structure of the complex between the HIV-1 nucleocapsid protein NCp7 and the single-stranded pentanucleotide d(ACGCC).
J.Mol.Biol., 283, 1998
1DSQ
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BU of 1dsq by Molmil
STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (ZINC FINGER 1)
Descriptor: NUCLEIC ACID BINDING PROTEIN P14, ZINC ION
Authors:Klein, D.J, Johnson, P.E, Zollars, E.S, De Guzman, R.N, Summers, M.F.
Deposit date:2000-01-08
Release date:2000-01-28
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:The NMR structure of the nucleocapsid protein from the mouse mammary tumor virus reveals unusual folding of the C-terminal zinc knuckle.
Biochemistry, 39, 2000
1ESK
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BU of 1esk by Molmil
SOLUTION STRUCTURE OF NCP7 FROM HIV-1
Descriptor: GAG POLYPROTEIN, ZINC ION
Authors:Morellet, N, Demene, H, Teilleux, V, Huynh-Dinh, T, de Rocquigny, H, Fournie-Zaluski, M.-C, Roques, B.P.
Deposit date:2000-04-10
Release date:2000-04-26
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution Structure of (12-53)NCp7 of HIV-1
To be Published
1F6U
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BU of 1f6u by Molmil
NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop sl2 of the psi-RNA packaging signal. Implications for genome recognition
Descriptor: HIV-1 NUCLEOCAPSID PROTEIN, HIV-1 STEM-LOOP SL2 FROM PSI-RNA PACKAGING, ZINC ION
Authors:Amarasinghe, G.K, De Guzman, R.N, Turner, R.B, Chancellor, K.J, Summers, M.F.
Deposit date:2000-06-23
Release date:2000-10-09
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition.
J.Mol.Biol., 301, 2000
1U6P
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BU of 1u6p by Molmil
NMR Structure of the MLV encapsidation signal bound to the Nucleocapsid protein
Descriptor: 101-MER, Gag polyprotein, ZINC ION
Authors:D'Souza, V, Summers, M.F.
Deposit date:2004-07-30
Release date:2004-11-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural basis for packaging the dimeric genome of Moloney murine leukaemia virus
Nature, 431, 2004
1WWG
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BU of 1wwg by Molmil
NMR Structure Determined for MLV NC Complex with RNA Sequence UAUCUG
Descriptor: 5'-R(P*UP*AP*UP*CP*UP*G)-3', Nucleoprotein p10, ZINC ION
Authors:Dey, A, York, D, Smalls-Mantey, A, Summers, M.F.
Deposit date:2005-01-05
Release date:2005-04-05
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Composition and sequence-dependent binding of RNA to the nucleocapsid protein of Moloney murine leukemia virus(,)
Biochemistry, 44, 2005
1WWF
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BU of 1wwf by Molmil
NMR Structure Determined for MLV NC Complex with RNA Sequence CCUCCGU
Descriptor: 5'-R(P*CP*CP*UP*CP*CP*GP*U)-3', Nucleoprotein p10, ZINC ION
Authors:Dey, A, York, D, Smalls-Mantey, A, Summers, M.F.
Deposit date:2005-01-05
Release date:2005-04-05
Last modified:2011-12-14
Method:SOLUTION NMR
Cite:Composition and sequence-dependent binding of RNA to the nucleocapsid protein of Moloney murine leukemia virus(,)
Biochemistry, 44, 2005
1WWD
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BU of 1wwd by Molmil
NMR structure determined for MLV NC complex with RNA sequence AACAGU
Descriptor: 5'-R(P*AP*AP*CP*AP*GP*U)-3', Nucleoprotein p10, ZINC ION
Authors:Dey, A, York, D, Smalls-Mantey, A, Summers, M.F.
Deposit date:2005-01-05
Release date:2005-03-22
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Composition and sequence-dependent binding of RNA to the nucleocapsid protein of Moloney murine leukemia virus(,)
Biochemistry, 44, 2005
1WWE
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BU of 1wwe by Molmil
NMR Structure Determined for MLV NC complex with RNA Sequence UUUUGCU
Descriptor: 5'-R(P*UP*UP*UP*UP*GP*CP*U)-3', Nucleoprotein p10, ZINC ION
Authors:Dey, A, York, D, Smalls-Mantey, A, Summers, M.F.
Deposit date:2005-01-05
Release date:2005-03-22
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Composition and sequence-dependent binding of RNA to the nucleocapsid protein of Moloney murine leukemia virus(,)
Biochemistry, 44, 2005
2L4L
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BU of 2l4l by Molmil
Structural insights into the cTAR DNA recognition by the HIV-1 Nucleocapsid protein: role of sugar deoxyriboses in the binding polarity of NC
Descriptor: 5'-D(*CP*TP*GP*G)-3', HIV-1 nucleocapsid protein NCp7, ZINC ION
Authors:Bazzi, A, Zargarian, L, Chaminade, F, Boudier, C, De Rocquigny, H, Rene, B, Mely, Y, Fosse, P, Mauffret, O.
Deposit date:2010-10-08
Release date:2010-12-08
Last modified:2011-08-17
Method:SOLUTION NMR
Cite:Structural insights into the cTAR DNA recognition by the HIV-1 nucleocapsid protein: role of sugar deoxyriboses in the binding polarity of NC.
Nucleic Acids Res., 39, 2011
2M3Z
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BU of 2m3z by Molmil
NMR solution structure of HIV-1 nucleocapsid protein in complex with an inhibitor displaying a 2 inhibitors:1 NC stoichiometry
Descriptor: (3E)-3-{(2Z)-[(5Z)-5-(furan-2-ylmethylidene)-4-oxo-1,3-thiazolidin-2-ylidene]hydrazinylidene}-2-oxo-2,3-dihydro-1H-indole-5-sulfonic acid, NUCLEOCAPSID PROTEIN P7, ZINC ION
Authors:Goudreau, N, Hucke, O.
Deposit date:2013-01-28
Release date:2013-02-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Discovery and Structural Characterization of a New Inhibitor Series of HIV-1 Nucleocapsid Function: NMR Solution Structure Determination of a Ternary Complex Involving a 2:1 Inhibitor/NC Stoichiometry.
J.Mol.Biol., 425, 2013
2MS0
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BU of 2ms0 by Molmil
Solution NMR structure pf tRNApro:MLV-Nucleocapsid (1:2) Complex
Descriptor: Nucleocapsid protein p10, ZINC ION, tRNApro
Authors:D'Souza, V, Yildiz, Z.
Deposit date:2014-07-19
Release date:2014-09-17
Last modified:2014-12-24
Method:SOLUTION NMR
Cite:A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing.
Nature, 515, 2014
2MS1
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BU of 2ms1 by Molmil
Solution NMR structure of tRNApro:MLV Nucleocapsid Protein (1:1) Complex
Descriptor: Nucleocapsid protein p10, ZINC ION, tRNApro
Authors:D'Souza, V, Yildiz, Z.
Deposit date:2014-07-19
Release date:2014-09-10
Last modified:2014-12-24
Method:SOLUTION NMR
Cite:A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing.
Nature, 515, 2014
2MQV
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BU of 2mqv by Molmil
Solution NMR structure of the U5-primer binding site (U5-PBS) domain of murine leukemia virus RNA genome bound to the retroviral nucleocapsid protein
Descriptor: Nucleocapsid protein p10, RNA (68-MER), ZINC ION
Authors:D'Souza, V.M, Yildiz, Z.
Deposit date:2014-06-27
Release date:2014-09-17
Last modified:2014-12-24
Method:SOLUTION NMR
Cite:A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing.
Nature, 515, 2014
2A51
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BU of 2a51 by Molmil
Structure of the (13-51) domain of the nucleocapsid protein NCp8 from SIVlhoest
Descriptor: ZINC ION, nucleocapsid protein
Authors:Morellet, N, Meudal, H, Bouaziz, S, Roques, B.P.
Deposit date:2005-06-30
Release date:2006-06-20
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structure of the zinc finger domain encompassing residues 13-51 of the nucleocapsid protein from simian immunodeficiency virus
Biochem.J., 393, 2006

 

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數據於2024-03-27公開中

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