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4WCG
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BU of 4wcg by Molmil
The binding mode of Cyprinid Herpesvirus3 ORF112-Zalpha to Z-DNA
Descriptor: DNA (5'-D(P*CP*GP*CP*GP*CP*G)-3'), ORF112, SULFATE ION
Authors:Kus, K, Athanasiadis, A.
Deposit date:2014-09-04
Release date:2015-11-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Structure of the Cyprinid herpesvirus 3 ORF112-Z alpha Z-DNA Complex Reveals a Mechanism of Nucleic Acids Recognition Conserved with E3L, a Poxvirus Inhibitor of Interferon Response.
J.Biol.Chem., 290, 2015
1J75
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BU of 1j75 by Molmil
Crystal Structure of the DNA-Binding Domain Zalpha of DLM-1 Bound to Z-DNA
Descriptor: 5'-D(*TP*CP*GP*CP*GP*CP*G)-3', Tumor Stroma and Activated Macrophage Protein DLM-1
Authors:Schwartz, T, Behlke, J, Lowenhaupt, K, Heinemann, U, Rich, A.
Deposit date:2001-05-15
Release date:2001-09-01
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the DLM-1-Z-DNA complex reveals a conserved family of Z-DNA-binding proteins.
Nat.Struct.Biol., 8, 2001
2ACJ
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BU of 2acj by Molmil
Crystal structure of the B/Z junction containing DNA bound to Z-DNA binding proteins
Descriptor: 5'-D(*AP*CP*GP*GP*TP*TP*TP*AP*TP*GP*GP*CP*GP*CP*GP*CP*G)-3', 5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*CP*CP*AP*TP*AP*AP*AP*CP*C)-3', Double-stranded RNA-specific adenosine deaminase
Authors:Ha, S.C, Lowenhaupt, K, Rich, A, Kim, Y.-G, Kim, K.K.
Deposit date:2005-07-19
Release date:2005-10-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases.
Nature, 437, 2005
5J6X
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BU of 5j6x by Molmil
Crystal structure of the apo-Zalpha of Zebrafish PKZ
Descriptor: Z-DNA binding protein kinase
Authors:Subramani, V.K, Kim, D, Kim, K.K.
Deposit date:2016-04-05
Release date:2016-09-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.493 Å)
Cite:Structural and functional studies of a large winged Z-DNA-binding domain of Danio rerio protein kinase PKZ
Febs Lett., 590, 2016
1XMK
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BU of 1xmk by Molmil
The Crystal structure of the Zb domain from the RNA editing enzyme ADAR1
Descriptor: CADMIUM ION, CHLORIDE ION, Double-stranded RNA-specific adenosine deaminase, ...
Authors:Athanasiadis, A, Placido, D, Maas, S, Brown II, B.A, Lowenhaupt, K, Rich, A.
Deposit date:2004-10-03
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:The Crystal Structure of the Z[beta] Domain of the RNA-editing Enzyme ADAR1 Reveals Distinct Conserved Surfaces Among Z-domains.
J.Mol.Biol., 351, 2005
2LNB
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BU of 2lnb by Molmil
Solution NMR structure of N-terminal domain (6-74) of human ZBP1 protein, Northeast Structural Genomics Consortium Target HR8174A.
Descriptor: Z-DNA-binding protein 1
Authors:Yang, Y, Ramelot, T.A, Hamilton, K, Kohan, E, Wang, D, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-12-20
Release date:2012-01-18
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution NMR structure of N-terminal domain (6-74) of human ZBP1 protein, Northeast Structural Genomics Consortium Target HR8174A
To be Published
4LB6
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BU of 4lb6 by Molmil
Crystal structure of PKZ Zalpha in complex with ds(CG)6 (tetragonal form)
Descriptor: 5'-D(*TP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*G)-3', Protein kinase containing Z-DNA binding domains
Authors:De Rosa, M, Zacarias, S, Athanasiadis, A.
Deposit date:2013-06-20
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for Z-DNA binding and stabilization by the zebrafish Z-DNA dependent protein kinase PKZ.
Nucleic Acids Res., 41, 2013
4LB5
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BU of 4lb5 by Molmil
Crystal structure of PKZ Zalpha in complex with ds(CG)6 (hexagonal form)
Descriptor: 5'-D(*TP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*G)-3', ACETATE ION, Protein kinase containing Z-DNA binding domains
Authors:De Rosa, M, Zacarias, S, Athanasiadis, A.
Deposit date:2013-06-20
Release date:2013-09-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for Z-DNA binding and stabilization by the zebrafish Z-DNA dependent protein kinase PKZ.
Nucleic Acids Res., 41, 2013
8GBD
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BU of 8gbd by Molmil
Homo sapiens Zalpha mutant - P193A
Descriptor: Double-stranded RNA-specific adenosine deaminase
Authors:Langeberg, C.J, Vogeli, B, Nichols, P.J, Henen, M, Vicens, Q.
Deposit date:2023-02-25
Release date:2023-03-22
Last modified:2023-03-29
Method:SOLUTION NMR
Cite:Differential Structural Features of Two Mutant ADAR1p150 Z alpha Domains Associated with Aicardi-Goutieres Syndrome.
J.Mol.Biol., 435, 2023
8GBC
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BU of 8gbc by Molmil
Homo sapiens Zalpha mutant - N173S
Descriptor: Double-stranded RNA-specific adenosine deaminase
Authors:Langeberg, C.J, Nichols, P.J, Henen, M, Vicens, Q, Vogeli, B.
Deposit date:2023-02-25
Release date:2023-03-22
Last modified:2023-03-29
Method:SOLUTION NMR
Cite:Differential Structural Features of Two Mutant ADAR1p150 Z alpha Domains Associated with Aicardi-Goutieres Syndrome.
J.Mol.Biol., 435, 2023
7C0I
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BU of 7c0i by Molmil
Crystal structure of chimeric mutant of E3L in complex with Z-DNA
Descriptor: DNA (5'-D(*TP*CP*GP*CP*GP*CP*G)-3'), Double-stranded RNA-binding protein,Double-stranded RNA-specific adenosine deaminase, SULFATE ION
Authors:Choi, H.J, Park, C.H, Kim, J.S.
Deposit date:2020-05-01
Release date:2020-12-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Dual conformational recognition by Z-DNA binding protein is important for the B-Z transition process.
Nucleic Acids Res., 48, 2020
3IRQ
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BU of 3irq by Molmil
Crystal structure of a Z-Z junction
Descriptor: DNA (5'-D(*AP*CP*CP*GP*CP*GP*CP*GP*AP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*TP*CP*GP*CP*GP*CP*G)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Athanasiadis, A, de Rosa, M.
Deposit date:2009-08-24
Release date:2010-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a junction between two Z-DNA helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
4HOB
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BU of 4hob by Molmil
The crystal structure of the Zalpha domain from Cyprinid Herpes virus 3
Descriptor: Putative uncharacterized protein, SULFATE ION
Authors:Tome, A.R, Kus, K, de Rosa, M, Paulo, L.M, Figueiredo, D, Athanasiadis, A.
Deposit date:2012-10-22
Release date:2013-09-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of a poxvirus-like zalpha domain from cyprinid herpesvirus 3
J.Virol., 87, 2013
3IRR
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BU of 3irr by Molmil
Crystal Structure of a Z-Z junction (with HEPES intercalating)
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(*A*CP*CP*GP*CP*GP*CP*GP*AP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*G*TP*CP*GP*CP*GP*CP*GP*TP*CP*GP*CP*GP*CP*G)-3'), ...
Authors:Athanasiadis, A, de Rosa, M.
Deposit date:2009-08-24
Release date:2010-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of a junction between two Z-DNA helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
4KMF
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BU of 4kmf by Molmil
Crystal structure of Zalpha domain from Carassius auratus PKZ in complex with Z-DNA
Descriptor: DNA (5'-D(*TP*CP*GP*CP*GP*CP*G)-3'), Interferon-inducible and double-stranded-dependent eIF-2kinase, MANGANESE (II) ION
Authors:Kim, D, Kim, K.K.
Deposit date:2013-05-08
Release date:2013-07-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Distinct Z-DNA binding mode of a PKR-like protein kinase containing a Z-DNA binding domain (PKZ).
Nucleic Acids Res., 42, 2014
2RVC
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BU of 2rvc by Molmil
Solution structure of Zalpha domain of goldfish ZBP-containing protein kinase
Descriptor: Interferon-inducible and double-stranded-dependent eIF-2kinase
Authors:Lee, A, Park, C, Park, J, Kwon, M, Choi, Y, Kim, K, Choi, B, Lee, J.
Deposit date:2015-07-08
Release date:2016-02-03
Last modified:2017-06-07
Method:SOLUTION NMR
Cite:Solution structure of the Z-DNA binding domain of PKR-like protein kinase from Carassius auratus and quantitative analyses of the intermediate complex during B-Z transition.
Nucleic Acids Res., 44, 2016
2GXB
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BU of 2gxb by Molmil
Crystal Structure of The Za Domain bound to Z-RNA
Descriptor: 5'-R(P*(DU)P*CP*GP*CP*GP*CP*G)-3', Double-stranded RNA-specific adenosine deaminase, SODIUM ION
Authors:Athanasiadis, A, Placido, D, Rich, A.
Deposit date:2006-05-08
Release date:2007-05-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A Left-Handed RNA Double Helix Bound by the Zalpha Domain of the RNA-Editing Enzyme ADAR1.
Structure, 15, 2007
2HEO
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BU of 2heo by Molmil
General Structure-Based Approach to the Design of Protein Ligands: Application to the Design of Kv1.2 Potassium Channel Blockers.
Descriptor: 5'-D(*TP*CP*GP*CP*GP*CP*G)-3', Z-DNA binding protein 1
Authors:Magis, C, Gasparini, S, Charbonnier, J.B, Stura, E, Le Du, M.H, Menez, A, Cuniasse, P.
Deposit date:2006-06-21
Release date:2006-11-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-based secondary structure-independent approach to design protein ligands: Application to the design of Kv1.2 potassium channel blockers.
J.Am.Chem.Soc., 128, 2006
5ZU1
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BU of 5zu1 by Molmil
Crystal Structure of BZ junction in diverse sequence
Descriptor: DNA (5'-D(*AP*CP*GP*GP*TP*TP*TP*AP*AP*GP*GP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*CP*CP*TP*TP*AP*AP*AP*CP*C)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Kim, K.K, Kim, D.
Deposit date:2018-05-05
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.009 Å)
Cite:Sequence preference and structural heterogeneity of BZ junctions.
Nucleic Acids Res., 46, 2018
5ZUO
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BU of 5zuo by Molmil
Crystal Structure of BZ junction in diverse sequence
Descriptor: DNA (5'-D(*AP*CP*GP*GP*TP*TP*TP*AP*TP*CP*GP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*CP*GP*AP*TP*AP*AP*AP*CP*C)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Kim, K.K, Kim, D.
Deposit date:2018-05-08
Release date:2018-08-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:Sequence preference and structural heterogeneity of BZ junctions.
Nucleic Acids Res., 46, 2018
5ZUP
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BU of 5zup by Molmil
Crystal Structure of BZ junction in diverse sequence
Descriptor: (5'-D(*AP*CP*GP*GP*TP*TP*TP*AP*TP*CP*GP*CP*GP*CP*GP*CP*G)-3'), (5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*CP*AP*AP*TP*AP*AP*AP*CP*C)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Kim, K.K, Kim, D.
Deposit date:2018-05-08
Release date:2018-08-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Sequence preference and structural heterogeneity of BZ junctions.
Nucleic Acids Res., 46, 2018
3F21
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BU of 3f21 by Molmil
Crystal structure of Zalpha in complex with d(CACGTG)
Descriptor: DNA (5'-D(*DTP*DCP*DAP*DCP*DGP*DTP*DG)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Ha, S.C, Choi, J, Kim, K.K.
Deposit date:2008-10-28
Release date:2008-12-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1
Nucleic Acids Res., 37, 2009
3F23
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BU of 3f23 by Molmil
Crystal structure of Zalpha in complex with d(CGGCCG)
Descriptor: DNA (5'-D(*DTP*DCP*DGP*DGP*DCP*DCP*DG)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Ha, S.C, Choi, J, Kim, K.K.
Deposit date:2008-10-28
Release date:2008-12-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1
Nucleic Acids Res., 37, 2009
3F22
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BU of 3f22 by Molmil
Crystal structure of Zalpha in complex with d(CGTACG)
Descriptor: DNA (5'-D(*DTP*DCP*DGP*DTP*DAP*DCP*DG)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Ha, S.C, Choi, J, Kim, K.K.
Deposit date:2008-10-28
Release date:2008-12-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1
Nucleic Acids Res., 37, 2009
2L54
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BU of 2l54 by Molmil
Solution structure of the Zalpha domain mutant of ADAR1 (N43A,Y47A)
Descriptor: Double-stranded RNA-specific adenosine deaminase
Authors:Zhao, J, Pervushin, K, Feng, S, Droge, P.
Deposit date:2010-10-24
Release date:2011-01-12
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Alternate rRNA secondary structures as regulators of translation
Nat.Struct.Mol.Biol., 18, 2011

 

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