Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4WY4
DownloadVisualize
BU of 4wy4 by Molmil
Crystal structure of autophagic SNARE complex
Descriptor: Synaptosomal-associated protein 29, Syntaxin-17, Vesicle-associated membrane protein 8
Authors:Zhao, M, Brunger, A.T.
Deposit date:2014-11-15
Release date:2015-02-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:ATG14 promotes membrane tethering and fusion of autophagosomes to endolysosomes.
Nature, 520, 2015
7BV6
DownloadVisualize
BU of 7bv6 by Molmil
Crystal structure of the autophagic STX17/SNAP29/VAMP8 SNARE complex
Descriptor: Synaptosomal-associated protein 29, Syntaxin-17, Vesicle-associated membrane protein 8
Authors:Li, Y, Pan, L.F.
Deposit date:2020-04-09
Release date:2020-09-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Decoding three distinct states of the Syntaxin17 SNARE motif in mediating autophagosome-lysosome fusion.
Proc.Natl.Acad.Sci.USA, 117, 2020
2KOG
DownloadVisualize
BU of 2kog by Molmil
lipid-bound synaptobrevin solution NMR structure
Descriptor: Vesicle-associated membrane protein 2
Authors:Ellena, J.F, Liang, B, Wiktor, M, Stein, A, Cafiso, D.S, Jahn, R, Tamm, L.K.
Deposit date:2009-09-22
Release date:2009-12-01
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Dynamic structure of lipid-bound synaptobrevin suggests a nucleation-propagation mechanism for trans-SNARE complex formation.
Proc.Natl.Acad.Sci.USA, 106, 2009
6WVW
DownloadVisualize
BU of 6wvw by Molmil
Crystal structure of the R59P-SNAP25 containing SNARE complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Synaptosomal-associated protein 25, ...
Authors:Zhou, Q, White, K.I, Brunger, A.T.
Deposit date:2020-05-07
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Role of Aberrant Spontaneous Neurotransmission in SNAP25-Associated Encephalopathies.
Neuron, 109, 2021
1GL2
DownloadVisualize
BU of 1gl2 by Molmil
Crystal structure of an endosomal SNARE core complex
Descriptor: ENDOBREVIN, SYNTAXIN 7, SYNTAXIN 8, ...
Authors:Antonin, W, Becker, S, Jahn, R, Schneider, T.R.
Deposit date:2001-08-22
Release date:2002-01-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Endosomal Snare Complex Reveals Common Structural Principles of All Snares.
Nat.Struct.Biol., 9, 2001
3RK3
DownloadVisualize
BU of 3rk3 by Molmil
Truncated SNARE complex with complexin
Descriptor: Complexin-1, SNAP25, Syntaxin 1a, ...
Authors:Kuemmel, D, Reinisch, K.M.
Deposit date:2011-04-17
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Complexin cross-links prefusion SNAREs into a zigzag array.
Nat.Struct.Mol.Biol., 18, 2011
3RL0
DownloadVisualize
BU of 3rl0 by Molmil
Truncated SNARE complex with complexin (P1)
Descriptor: Complexin-1, Synaptosomal-associated protein 25, Syntaxin-1A, ...
Authors:Kuemmel, D, Reinisch, K.M.
Deposit date:2011-04-19
Release date:2011-07-27
Last modified:2011-08-24
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Complexin cross-links prefusion SNAREs into a zigzag array.
Nat.Struct.Mol.Biol., 18, 2011
3RK2
DownloadVisualize
BU of 3rk2 by Molmil
Truncated SNARE complex
Descriptor: CALCIUM ION, Synaptosomal-associated protein 25, Syntaxin-1A, ...
Authors:Kuemmel, D, Reinisch, K.M.
Deposit date:2011-04-17
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Complexin cross-links prefusion SNAREs into a zigzag array.
Nat.Struct.Mol.Biol., 18, 2011
3ZYM
DownloadVisualize
BU of 3zym by Molmil
Structure of CALM (PICALM) in complex with VAMP8
Descriptor: GLYCEROL, PHOSPHATE ION, PHOSPHATIDYLINOSITOL-BINDING CLATHRIN ASSEMBLY PROTEIN, ...
Authors:Miller, S.E, Sahlender, D.A, Graham, S.C, Honing, S, Robinson, M.S, Peden, A.A, Owen, D.J.
Deposit date:2011-08-23
Release date:2011-12-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:The molecular basis for the endocytosis of small R-SNAREs by the clathrin adaptor CALM.
Cell, 147, 2011
1N7S
DownloadVisualize
BU of 1n7s by Molmil
High Resolution Structure of a Truncated Neuronal SNARE Complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, SNAP-25A, ...
Authors:Ernst, J.A, Brunger, A.T.
Deposit date:2002-11-16
Release date:2002-12-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:High Resolution Structure, Stability, and Synaptotagmin Binding of a Truncated Neuronal SNARE Complex
J.Biol.Chem., 278, 2003
4B93
DownloadVisualize
BU of 4b93 by Molmil
Complex of Vamp7 cytoplasmic domain with 2nd ankyrin repeat domain of Varp
Descriptor: ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27, VESICLE-ASSOCIATED MEMBRANE PROTEIN 7
Authors:Schaefer, I.B, Owen, D.J, Luzio, J.P, Evans, P.R.
Deposit date:2012-08-31
Release date:2012-10-31
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Binding of Varp to Vamp7 Traps Vamp7 in a Closed, Fusogenically Inactive Conformation.
Nat.Struct.Mol.Biol., 19, 2012
1KIL
DownloadVisualize
BU of 1kil by Molmil
Three-dimensional structure of the complexin/SNARE complex
Descriptor: Complexin I SNARE-complex binding region, MAGNESIUM ION, SNAP-25 C-terminal SNARE motif, ...
Authors:Chen, X, Tomchick, D, Kovrigin, E, Arac, D, Machius, M, Sudhof, T.C, Rizo, J.
Deposit date:2001-12-03
Release date:2002-03-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Three-dimensional structure of the complexin/SNARE complex.
Neuron, 33, 2002
5BV0
DownloadVisualize
BU of 5bv0 by Molmil
Crystal Structure of a Complex Between the SNARE Nyv1 and the HOPS Vps33-Vps16 subcomplex from Chaetomium thermophilum
Descriptor: SM (Sec1/Munc18-like) protein, SNARE domain, Vps16
Authors:Baker, R.W, Jeffrey, P.D, Hughson, F.M.
Deposit date:2015-06-04
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A direct role for the Sec1/Munc18-family protein Vps33 as a template for SNARE assembly.
Science, 349, 2015
2NPS
DownloadVisualize
BU of 2nps by Molmil
Crystal Structure of the Early Endosomal SNARE Complex
Descriptor: Syntaxin 13, Syntaxin-6, Vesicle transport through interaction with t-SNAREs homolog 1A, ...
Authors:Zwilling, D, Cypionka, A, Pohl, W.H, Fasshauer, D, Walla, P.J, Wahl, M.C, Jahn, R.
Deposit date:2006-10-30
Release date:2006-12-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Early endosomal SNAREs form a structurally conserved SNARE complex and fuse liposomes with multiple topologies
Embo J., 26, 2007
3B5N
DownloadVisualize
BU of 3b5n by Molmil
Structure of the yeast plasma membrane SNARE complex
Descriptor: Protein SSO1, Protein transport protein SEC9, Synaptobrevin homolog 1
Authors:Strop, P, Brunger, A.T.
Deposit date:2007-10-26
Release date:2007-11-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Structure of the Yeast Plasma Membrane SNARE Complex Reveals Destabilizing Water-filled Cavities.
J.Biol.Chem., 283, 2008
3FII
DownloadVisualize
BU of 3fii by Molmil
Crystal structure of Clostridium botulinum neurotoxin serotype F catalytic domain with an inhibitor (inh2)
Descriptor: BOTULINUM NEUROTOXIN TYPE F, ZINC ION, fragment of Vesicle-associated membrane protein 2
Authors:Agarwal, R, Swaminathan, S.
Deposit date:2008-12-11
Release date:2009-06-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Mode of VAMP substrate recognition and inhibition of Clostridium botulinum neurotoxin F.
Nat.Struct.Mol.Biol., 16, 2009
3FIE
DownloadVisualize
BU of 3fie by Molmil
Crystal structure of Clostridium botulinum neurotoxin serotype F catalytic domain with an inhibitor (inh1)
Descriptor: BOTULINUM NEUROTOXIN TYPE F, ZINC ION, fragment of Vesicle-associated membrane protein 2
Authors:Agarwal, R, Swaminathan, S.
Deposit date:2008-12-11
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mode of VAMP substrate recognition and inhibition of Clostridium botulinum neurotoxin F.
Nat.Struct.Mol.Biol., 16, 2009
3HD7
DownloadVisualize
BU of 3hd7 by Molmil
HELICAL EXTENSION OF THE NEURONAL SNARE COMPLEX INTO THE MEMBRANE, spacegroup C 1 2 1
Descriptor: SULFATE ION, Synaptosomal-associated protein 25, Syntaxin-1A, ...
Authors:Stein, A, Weber, G, Wahl, M.C, Jahn, R.
Deposit date:2009-05-07
Release date:2009-07-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Helical extension of the neuronal SNARE complex into the membrane
Nature, 460, 2009
3IPD
DownloadVisualize
BU of 3ipd by Molmil
Helical extension of the neuronal SNARE complex into the membrane, spacegroup I 21 21 21
Descriptor: Synaptosomal-associated protein 25, Syntaxin-1A, Vesicle-associated membrane protein 2
Authors:Stein, A, Weber, G, Wahl, M.C, Jahn, R.
Deposit date:2009-08-17
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (4.8 Å)
Cite:Helical extension of the neuronal SNARE complex into the membrane
Nature, 460, 2009
3KYQ
DownloadVisualize
BU of 3kyq by Molmil
Lipid-induced Conformational Switch Controls Fusion Activity of Longin Domain SNARE Ykt6
Descriptor: SULFATE ION, Synaptobrevin homolog YKT6, dodecyl 2-(trimethylammonio)ethyl phosphate
Authors:Yu, J, Wen, W.Y, Zhang, M.J.
Deposit date:2009-12-07
Release date:2010-03-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.443 Å)
Cite:Lipid-Induced Conformational Switch Controls Fusion Activity of Longin Domain SNARE Ykt6
Mol.Cell, 37, 2010
8HR0
DownloadVisualize
BU of 8hr0 by Molmil
The complex structure of COPII coat with HCoV-OC43 DD sorting motif
Descriptor: HCoV-OC43, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
Authors:Ma, W.F, Nan, Y.N, Yang, M.R, Li, Y.Q.
Deposit date:2022-12-14
Release date:2023-12-20
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Tighter ER retention of SARS-CoV-2 Omicron spike caused by a constellation of folding disruptive mutations
To Be Published
5KJ7
DownloadVisualize
BU of 5kj7 by Molmil
Structure of the Ca2+-bound synaptotagmin-1 SNARE complex (long unit cell form) - from XFEL diffraction
Descriptor: CALCIUM ION, Synaptosomal-associated protein 25, Synaptotagmin-1, ...
Authors:Lyubimov, A.Y, Uervirojnangkoorn, M, Zhou, Q, Zhao, M, Sauter, N.K, Brewster, A.S, Weis, W.I, Brunger, A.T.
Deposit date:2016-06-17
Release date:2016-10-19
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Advances in X-ray free electron laser (XFEL) diffraction data processing applied to the crystal structure of the synaptotagmin-1 / SNARE complex.
Elife, 5, 2016
5KJ8
DownloadVisualize
BU of 5kj8 by Molmil
Structure of the Ca2+-bound synaptotagmin-1 SNARE complex (long unit cell form) - from synchrotron diffraction
Descriptor: CALCIUM ION, Synaptosomal-associated protein 25, Synaptotagmin-1, ...
Authors:Lyubimov, A.Y, Uervirojnangkoorn, M, Zhou, Q, Zhao, M, Sauter, N.K, Brewster, A.S, Weis, W.I, Brunger, A.T.
Deposit date:2016-06-17
Release date:2016-10-19
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Advances in X-ray free electron laser (XFEL) diffraction data processing applied to the crystal structure of the synaptotagmin-1 / SNARE complex.
Elife, 5, 2016
7UDC
DownloadVisualize
BU of 7udc by Molmil
cryo-EM structures of a synaptobrevin-Munc18-1-syntaxin-1 complex class1
Descriptor: Synaptobrevin-2, Syntaxin-1A, Syntaxin-binding protein 1
Authors:Rizo, J, Bai, X, Stepien, K.P, Xu, J, Zhang, X.
Deposit date:2022-03-18
Release date:2022-04-06
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:SNARE assembly enlightened by cryo-EM structures of a synaptobrevin-Munc18-1-syntaxin-1 complex.
Sci Adv, 8, 2022
7UDB
DownloadVisualize
BU of 7udb by Molmil
Cryo-EM structure of a synaptobrevin-Munc18-1-syntaxin-1 complex class 2
Descriptor: Synaptobrevin-2, Syntaxin-1A, Syntaxin-binding protein 1
Authors:Rizo, J, Bai, X, Stepien, K.P, Xu, J, Zhang, X.
Deposit date:2022-03-18
Release date:2022-04-06
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:SNARE assembly enlightened by cryo-EM structures of a synaptobrevin-Munc18-1-syntaxin-1 complex.
Sci Adv, 8, 2022

 

123>

217705

数据于2024-03-27公开中

PDB statisticsPDBj update infoContact PDBjnumon