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7RZM
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BU of 7rzm by Molmil
Crystal Structure of dnaN DNA polymerase III beta subunit from Stenotrophomonas maltophilia K279a
Descriptor: DNA polymerase III subunit beta
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-08-27
Release date:2021-10-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure of dnaN DNA polymerase III beta subunit from Stenotrophomonas maltophilia K279a
To Be Published
5M1S
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BU of 5m1s by Molmil
Cryo-EM structure of the E. coli replicative DNA polymerase-clamp-exonuclase-theta complex bound to DNA in the editing mode
Descriptor: DNA Primer Strand, DNA Template Strand, DNA polymerase III subunit alpha, ...
Authors:Fernandez-Leiro, R, Conrad, J, Scheres, S.H.W, Lamers, M.H.
Deposit date:2016-10-10
Release date:2017-01-18
Last modified:2018-10-24
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Self-correcting mismatches during high-fidelity DNA replication.
Nat. Struct. Mol. Biol., 24, 2017
1OK7
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BU of 1ok7 by Molmil
A Conserved protein binding-site on Bacterial Sliding Clamps
Descriptor: DNA POLYMERASE III, DNA POLYMERASE IV
Authors:Burnouf, D.Y, Olieric, V, Wagner, J, Fujii, S, Reinbolt, J, Fuchs, R.P.P, Dumas, P.
Deposit date:2003-07-18
Release date:2004-07-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural and Biochemical Analysis of Sliding Clamp/Ligand Interactions Suggest a Competition between Replicative and Translesion DNA Polymerases
J.Mol.Biol., 335, 2004
7EVP
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BU of 7evp by Molmil
Cryo-EM structure of the Gp168-beta-clamp complex
Descriptor: Beta sliding clamp, Sliding clamp inhibitor
Authors:Liu, B, Li, S, Liu, Y, Chen, H, Hu, Z, Wang, Z, Gou, L, Zhang, L, Ma, B, Wang, H, Matthews, S, Wang, Y, Zhang, K.
Deposit date:2021-05-21
Release date:2022-02-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Bacteriophage Twort protein Gp168 is a beta-clamp inhibitor by occupying the DNA sliding channel.
Nucleic Acids Res., 49, 2021
2XUR
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BU of 2xur by Molmil
The G157C mutation in the Escherichia coli sliding clamp specifically affects initiation of replication
Descriptor: DNA POLYMERASE III SUBUNIT BETA
Authors:Johnsen, L, Morigen, Dalhus, B, Bjoras, M, Flaatten, I, Waldminghaus, T, Skarstad, K.
Deposit date:2010-10-20
Release date:2011-02-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The G157C Mutation in the Escherichia Coli Sliding Clamp Specifically Affects Initiation of Replication.
Mol.Microbiol., 79, 2011
2POL
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BU of 2pol by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE BETA SUBUNIT OF ESCHERICHIA COLI DNA POLYMERASE III HOLOENZYME: A SLIDING DNA CLAMP
Descriptor: DNA POLYMERASE III (BETA SUBUNIT)
Authors:Kong, X.-P, Kuriyan, J.
Deposit date:1992-11-13
Release date:1994-01-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp.
Cell(Cambridge,Mass.), 69, 1992
5W7Z
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BU of 5w7z by Molmil
Crystal structure of DNA polymerase III subunit beta from Rickettsia conorii
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,2-ETHANEDIOL, DNA polymerase III subunit beta
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-06-21
Release date:2017-07-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of DNA polymerase III subunit beta from Rickettsia conorii
to be published
7YBD
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BU of 7ybd by Molmil
Crystal structure of sliding DNA clamp of Clostridioides difficile
Descriptor: Beta sliding clamp, TRIETHYLENE GLYCOL
Authors:Hishiki, A, Okazaki, S, Hara, K, Hashimoto, H.
Deposit date:2022-06-29
Release date:2022-10-19
Last modified:2023-01-11
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structure of the sliding DNA clamp from the Gram-positive anaerobic bacterium Clostridioides difficile.
J.Biochem., 173, 2022
8DK9
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BU of 8dk9 by Molmil
Sliding-clamp-DinX peptide
Descriptor: ACETYL GROUP, AMINO GROUP, Beta sliding clamp, ...
Authors:Kapur, M.K, Gray, O.J, Honzatko, R.H, Nelson, S.N.
Deposit date:2022-07-05
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Interaction of sliding clamp with mycobacterial polymerases
To Be Published
6JIR
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BU of 6jir by Molmil
Crystal structure of C. crescentus beta sliding clamp with PEG bound to putative beta-motif tethering region
Descriptor: 1,2-ETHANEDIOL, Beta sliding clamp, DI(HYDROXYETHYL)ETHER, ...
Authors:Jiang, X, Teng, M, Li, X.
Deposit date:2019-02-23
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Caulobacter crescentus beta sliding clamp employs a noncanonical regulatory model of DNA replication.
Febs J., 287, 2020
8DJ6
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BU of 8dj6 by Molmil
Sliding-clamp-ImuB peptide
Descriptor: ACETATE ION, Beta sliding clamp, FORMIC ACID, ...
Authors:Kapur, M.K, Gray, O.J, Honzatko, R.H, Nelson, S.N.
Deposit date:2022-06-30
Release date:2023-07-26
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Interaction of sliding clamp with mycobacterial polymerases
To Be Published
3RB9
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BU of 3rb9 by Molmil
Crystal structure of the M. tuberculosis beta clamp
Descriptor: DNA polymerase III subunit beta
Authors:Kukshal, V, Ramachandran, R.
Deposit date:2011-03-29
Release date:2012-04-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:M. tuberculosis Sliding beta-Clamp Does Not Interact Directly with the NAD(+)-Dependent DNA Ligase
Plos One, 7, 2012
3T0P
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BU of 3t0p by Molmil
Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-07-20
Release date:2011-08-10
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution
To be published
6MAN
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BU of 6man by Molmil
Crystal structure of a DnaN sliding clamp DNA polymerase III subunit beta from Rickettsia bellii RML369-C
Descriptor: 1,2-ETHANEDIOL, Beta sliding clamp, THIOCYANATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-08-28
Release date:2018-09-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of a DnaN sliding clamp DNA polymerase III subunit beta from Rickettsia bellii RML369-C
To Be Published
2AVT
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BU of 2avt by Molmil
Crystal structure of the beta subunit from DNA polymerase of Streptococcus pyogenes
Descriptor: DNA polymerase III beta subunit
Authors:Argiriadi, M.A, Goedken, E.R, Bruck, I, O'donnell, M, Kuriyan, J.
Deposit date:2005-08-30
Release date:2006-01-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a DNA polymerase sliding clamp from a Gram-positive bacterium.
Bmc Struct.Biol., 6, 2006
2AWA
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BU of 2awa by Molmil
Crystal structure of DNA polymerase III, beta chain (EC 2.7.7.7) (np_344555.1) from STREPTOCOCCUS PNEUMONIAE TIGR4 at 2.50 A resolution
Descriptor: DNA polymerase III, beta chain, GLYCEROL
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-08-31
Release date:2005-09-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of DNA polymerase III, beta chain (EC 2.7.7.7) (np_344555.1) from STREPTOCOCCUS PNEUMONIAE TIGR4 at 2.50 A resolution
To be published
1UNN
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BU of 1unn by Molmil
Complex of beta-clamp processivity factor and little finger domain of PolIV
Descriptor: DNA POLYMERASE III BETA SUBUNIT, DNA POLYMERASE IV, SULFATE ION
Authors:Bunting, K.A, Roe, S.M, Pearl, L.H.
Deposit date:2003-09-11
Release date:2003-11-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Recruitment of Translesion DNA Polymerase Pol Iv/Dinb to the Beta-Clamp
Embo J., 22, 2003
1VPK
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BU of 1vpk by Molmil
Crystal structure of DNA polymerase III, beta subunit (TM0262) from Thermotoga maritima at 2.00 A resolution
Descriptor: DNA polymerase III, beta subunit
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-11-09
Release date:2004-11-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of DNA polymerase III, beta subunit (TM0262) from Thermotoga maritima at 2.00 A resolution
To be published
8PAT
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BU of 8pat by Molmil
Structure of the E.coli DNA polymerase sliding clamp with a covalently bound peptide 3.
Descriptor: ACE-GLN-ALC-GLX-LEU-PHE, Beta sliding clamp
Authors:Compain, G, Monsarrat, C, Blagojevic, J, Brillet, K, Dumas, P, Hammann, P, Kuhn, L, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Burnouf, D, Guichard, G.
Deposit date:2023-06-08
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Peptide-Based Covalent Inhibitors Bearing Mild Electrophiles to Target a Conserved His Residue of the Bacterial Sliding Clamp.
Jacs Au, 4, 2024
8PAY
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BU of 8pay by Molmil
Structure of the E.coli DNA polymerase sliding clamp with a covalently bound peptide 2.
Descriptor: ACE-GLN-ALC-GLC-LEU-PHE, Beta sliding clamp, GLYCEROL, ...
Authors:Compain, G, Monsarrat, C, Blagojevic, J, Brillet, K, Dumas, P, Hammann, P, Kuhn, L, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Burnouf, D, wagner, J, Guichard, G.
Deposit date:2023-06-08
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Peptide-Based Covalent Inhibitors Bearing Mild Electrophiles to Target a Conserved His Residue of the Bacterial Sliding Clamp.
Jacs Au, 4, 2024
6FVM
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BU of 6fvm by Molmil
Mutant DNA polymerase sliding clamp from Escherichia coli with bound P7 peptide
Descriptor: Beta sliding clamp, CALCIUM ION, GLYCEROL, ...
Authors:Martiel, I, Andre, C, Olieric, V, Guichard, G, Burnouf, D.
Deposit date:2018-03-04
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:Peptide Interactions on Bacterial Sliding Clamps.
Acs Infect Dis., 2019
6FVN
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BU of 6fvn by Molmil
DNA polymerase sliding clamp from Mycobacterium tuberculosis with bound P7 peptide
Descriptor: Beta sliding clamp, P7 peptide
Authors:Martiel, I, Andre, C, Olieric, V, Guichard, G, Burnouf, D.
Deposit date:2018-03-04
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.142 Å)
Cite:Peptide Interactions on Bacterial Sliding Clamps.
Acs Infect Dis., 2019
6PTR
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BU of 6ptr by Molmil
Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Bartonella birtlesii bound to griselimycin
Descriptor: 1,2-ETHANEDIOL, ACE-MVA-MP8-NZC-LEU-MP8-LEU-MVA-PRO-MLU-GLY, Beta sliding clamp, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-07-16
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Bartonella birtlesii bound to griselimycin
To Be Published
6PTV
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BU of 6ptv by Molmil
Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Rickettsia rickettsii bound to griselimycin
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACE-MVA-MP8-NZC-LEU-MP8-LEU-MVA-PRO-MLU-GLY, Beta sliding clamp
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-07-16
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Rickettsia rickettsii bound to griselimycin
To Be Published
6PTH
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BU of 6pth by Molmil
Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Pseudomonas aeruginosa bound to griselimycin
Descriptor: Beta sliding clamp, Griselimycin, SULFATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-07-15
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Pseudomonas aeruginosa bound to griselimycin
To Be Published

217705

数据于2024-03-27公开中

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