PDB: 82 件ウェブページステータス検索Chemie searchBIRD

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5KBP	The crystal structure of an alpha-mannosidase from Enterococcus faecalis V583 分子名称: Glycosyl hydrolase, family 38, SULFATE ION 著者 Tan, K, Chhor, G, Jedrzejczak, R, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2016-06-03 公開日 2016-07-13 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The crystal structure of an alpha-mannosidase from Enterococcus faecalis V583 To Be Published
3LVT	The Crystal Structure of a Protein in the Glycosyl Hydrolase Family 38 from Enterococcus faecalis to 2.55A 分子名称: CALCIUM ION, Glycosyl hydrolase, family 38 著者 Stein, A.J, Binkowski, T.A, Weger, A, Borovilos, M, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2010-02-22 公開日 2010-03-16 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 The Crystal Structure of a Protein in the Glycosyl Hydrolase Family 38 from Enterococcus faecalis to 2.55A To be Published
2ALW	Golgi alpha-mannosidase II complex with Noeuromycin 分子名称: (2S,3S,4R,5R)-2,3,4-TRIHYDROXY-5-HYDROXYMETHYL-PIPERIDINE, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Kuntz, D.A, Bols, M.B, Liu, H, Rose, D.R. 登録日 2005-08-08 公開日 2006-07-04 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 The role of the active site Zn in the catalytic mechanism of the GH38 Golgi alpha-mannosidase II: implications from noeuromycin inhibition Biocatal.Biotransfor., 34, 2006
7DD9	Cryo-EM structure of the Ams1 and Nbr1 complex 分子名称: Alpha-mannosidase,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein, ZINC ION 著者 Zhang, J, Ye, K. 登録日 2020-10-28 公開日 2021-07-14 最終更新日 2021-08-11 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Molecular and structural mechanisms of ZZ domain-mediated cargo selection by Nbr1. Embo J., 40, 2021
5JM0	Structure of the S. cerevisiae alpha-mannosidase 1 分子名称: Alpha-mannosidase,Alpha-mannosidase,Alpha-mannosidase 著者 Schneider, S, Kosinski, J, Jakobi, A.J, Hagen, W.J.H, Sachse, C. 登録日 2016-04-28 公開日 2016-06-15 最終更新日 2017-08-02 実験手法 ELECTRON MICROSCOPY (6.3 Å) 主引用文献 Higher-order assemblies of oligomeric cargo receptor complexes form the membrane scaffold of the Cvt vesicle. Embo Rep., 17, 2016
6LZ1	Structure of S.pombe alpha-mannosidase Ams1 分子名称: Ams1, ZINC ION 著者 Zhang, J, Ye, K. 登録日 2020-02-17 公開日 2020-09-09 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-EM structure of fission yeast tetrameric alpha-mannosidase Ams1. Febs Open Bio, 10, 2020
2WYH	Structure of the Streptococcus pyogenes family GH38 alpha-mannosidase 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ALPHA-MANNOSIDASE, GLYCEROL, ... 著者 Suits, M.D.L, Zhu, Y, Taylor, E.J, Zechel, D.L, Gilbert, H.J, Davies, G.J. 登録日 2009-11-16 公開日 2010-02-16 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure and Kinetic Investigation of Streptococcus Pyogenes Family Gh38 Alpha-Mannosidase Plos One, 5, 2010
2WYI	Structure of the Streptococcus pyogenes family GH38 alpha-mannosidase complexed with swainsonine 分子名称: 1S-8AB-OCTAHYDRO-INDOLIZIDINE-1A,2A,8B-TRIOL, 2-(2-METHOXYETHOXY)ETHANOL, ALPHA-MANNOSIDASE, ... 著者 Suits, M.D.L, Zhu, Y, Taylor, E.J, Zechel, D.L, Gilbert, H.J, Davies, G.J. 登録日 2009-11-16 公開日 2010-02-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure and Kinetic Investigation of Streptococcus Pyogenes Family Gh38 Alpha-Mannosidase Plos One, 5, 2010
2OW6	Golgi alpha-mannosidase II complex with (1r,5s,6s,7r,8s)-1-thioniabicyclo[4.3.0]nonan-5,7,8-triol chloride 分子名称: (1R,5S,6S,7R,8S)-1-THIONIABICYCLO[4.3.0]NONAN-5,7,8-TRIOL, (4R)-2-METHYLPENTANE-2,4-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Kuntz, D.A. 登録日 2007-02-15 公開日 2008-01-08 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.19 Å) 主引用文献 Binding of sulfonium-ion analogues of di-epi-swainsonine and 8-epi-lentiginosine to Drosophila Golgi alpha-mannosidase II: The role of water in inhibitor binding. Proteins, 71, 2008
2OW7	Golgi alpha-mannosidase II complex with (1R,6S,7R,8S)-1-thioniabicyclo[4.3.0]nonan-7,8-diol chloride 分子名称: (1R,6S,7R,8S)-1-THIONIABICYCLO[4.3.0]NONAN-7,8-DIOL, (4R)-2-METHYLPENTANE-2,4-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Kuntz, D.A. 登録日 2007-02-15 公開日 2008-01-08 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Binding of sulfonium-ion analogues of di-epi-swainsonine and 8-epi-lentiginosine to Drosophila Golgi alpha-mannosidase II: The role of water in inhibitor binding. Proteins, 71, 2008
6B9O	Structure of GH 38 Jack Bean alpha-mannosidase 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-mannosidase from Canavalia ensiformis (jack bean), ZINC ION, ... 著者 Howard, E, Cousido-Siah, A, Lepage, M, Bodlenner, A, Mitschler, A, Meli, A, De Riccardis, F, Izzo, I, Podjarny, A, Compain, P. 登録日 2017-10-11 公開日 2018-09-26 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.841 Å) 主引用文献 Structural Basis of Outstanding Multivalent Effects in Jack Bean alpha-Mannosidase Inhibition. Angew. Chem. Int. Ed. Engl., 57, 2018
6B9P	Structure of GH 38 Jack Bean alpha-mannosidase in complex with a 36-valent iminosugar cluster inhibitor 分子名称: (2R,3R,4R,5S)-2-(hydroxymethyl)-1-{9-[4-(methoxymethyl)-1H-1,2,3-triazol-1-yl]nonyl}piperidine-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-mannosidase from Canavalia ensiformis (jack bean), ... 著者 Howard, E, Cousido-Siah, A, Lepage, M, Bodlenner, A, Mitschler, A, Meli, A, De Riccardis, F, Izzo, I, Podjarny, A, Compain, P. 登録日 2017-10-11 公開日 2018-09-26 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.996 Å) 主引用文献 Structural Basis of Outstanding Multivalent Effects in Jack Bean alpha-Mannosidase Inhibition. Angew. Chem. Int. Ed. Engl., 57, 2018
1HTY	GOLGI ALPHA-MANNOSIDASE II 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 van den Elsen, J.M.H, Kuntz, D.A, Rose, D.R. 登録日 2001-01-02 公開日 2002-01-02 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structure of Golgi alpha-mannosidase II: a target for inhibition of growth and metastasis of cancer cells. EMBO J., 20, 2001
1HXK	GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH DEOXYMANNOJIRIMICIN 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1-DEOXYMANNOJIRIMYCIN, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 van den Elsen, J.M.H, Kuntz, D.A, Rose, D.R. 登録日 2001-01-16 公開日 2002-01-16 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure of Golgi alpha-mannosidase II: a target for inhibition of growth and metastasis of cancer cells. EMBO J., 20, 2001
1HWW	GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH SWAINSONINE 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1S-8AB-OCTAHYDRO-INDOLIZIDINE-1A,2A,8B-TRIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 van den Elsen, J.M.H, Kuntz, D.A, Rose, D.R. 登録日 2001-01-10 公開日 2002-01-10 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Structure of Golgi alpha-mannosidase II: a target for inhibition of growth and metastasis of cancer cells. EMBO J., 20, 2001
1TQV	Golgi alpha-Mannosidase II In Complex With Seleno-Salacinol (Blintol) 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,4-DIDEOXY-1,4-[[2S,3S)-2,4-DIHYDROXY-3-(SULFOXY)BUTYL]EPISELENONIUMYLIDENE]-D-ARABINITOL INNER SALT, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Kuntz, D.A, Ghavami, A, Johnston, B.D, Pinto, B.M, Rose, D.R. 登録日 2004-06-18 公開日 2005-02-01 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Crystallographic analysis of the interactions of Drosophila melanogaster Golgi alpha-mannosidase II with the naturally occurring glycomimetic salacinol and its analogues TETRAHEDRON ASYMMETRY, 16, 2005
1TQT	Golgi alpha-Mannosidase II In Complex With A Diastereomer of Salacinol 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,4-DIDEOXY-1,4-[[2R,3R)-2,4-DIHYDROXY-3-(SULFOXY)BUTYL]EPISULFONIUMYLIDENE]-D-ARABINITOL INNER SALT, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Kuntz, D.A, Ghavami, A, Johnston, B.D, Pinto, B.M, Rose, D.R. 登録日 2004-06-18 公開日 2005-01-25 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystallographic analysis of the interactions of Drosophila melanogaster Golgi alpha-mannosidase II with the naturally occurring glycomimetic salacinol and its analogues Tetrahedron Asymmetry, 16, 2005
1TQW	Golgi alpha-Mannosidase II In Complex With A Diastereomer of Seleno-Salacinol 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,4-DIDEOXY-1,4-[[2R,3R)-2,4-DIHYDROXY-3-(SULFOXY)BUTYL]EPISELENONIUMYLIDENE]-D-ARABINITOL INNER SALT, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Kuntz, D.A, Ghavami, A, Johnston, B.D, Pinto, B.M, Rose, D.R. 登録日 2004-06-18 公開日 2005-02-01 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Insights into the Mechanism of Drosophila melanogaster Golgi a-Mannosidase II Through Crystallographic Analysis of the Interactions with Analogues of the Naturally Occurring Glycomimetic Salacinol TETRAHEDRON ASYMMETRY, 16, 2005
1TQS	Golgi alpha-Mannosidase II In Complex With Salacinol 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,4-DIDEOXY-1,4-[[2S,3S)-2,4-DIHYDROXY-3-(SULFOXY)BUTYL]EPISULFONIUMYLIDENE]-D-ARABINITOL INNER SALT, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Kuntz, D.A, Ghavami, A, Johnston, B.D, Pinto, B.M, Rose, D.R. 登録日 2004-06-18 公開日 2005-01-25 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Crystallographic analysis of the interactions of Drosophila melanogaster Golgi alpha-mannosidase II with the naturally occurring glycomimetic salacinol and its analogues Tetrahedron Asymmetry, 16, 2005
1TQU	Golgi alpha-Mannosidase II In Complex With The Salacinol Analog Ghavamiol 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1'-((1,4-DIDEOXY-1,4-IMINO-D-ARABINITOL)-4-N-AMMONIUM)-1'-DEOXY-L-ERYTHRITOL-3'-SULFATE INNER SALT, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Kuntz, D.A, Ghavami, A, Johnston, B.D, Pinto, B.M, Rose, D.R. 登録日 2004-06-18 公開日 2005-01-25 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Crystallographic analysis of the interactions of Drosophila melanogaster Golgi alpha-mannosidase II with the naturally occurring glycomimetic salacinol and its analogues Tetrahedron Asymmetry, 16, 2005
7UFU	Cryo-EM Structure of Bl_Man38A nucleophile mutant in complex with mannose at 2.7 A 分子名称: Alpha-mannosidase, ZINC ION, alpha-D-mannopyranose 著者 Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V. 登録日 2022-03-23 公開日 2022-11-16 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Cryo-EM Structure of Bl_Man38A nucleophile mutant in complex with mannose at 2.7 A Nat.Chem.Biol., 2022
7UFT	Cryo-EM Structure of Bl_Man38C at 2.9 A 分子名称: Alpha-mannosidase, ZINC ION 著者 Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V. 登録日 2022-03-23 公開日 2022-11-16 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Cryo-EM Structure of Bl_Man38C at 2.9 A Nat.Chem.Biol., 2022
7UFS	Cryo-EM Structure of Bl_Man38B at 3.4 A 分子名称: Alpha-mannosidase, ZINC ION 著者 Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V. 登録日 2022-03-23 公開日 2022-11-16 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Cryo-EM Structure of Bl_Man38B at 3.4 A Nat.Chem.Biol., 2022
7UFR	Cryo-EM Structure of Bl_Man38A at 2.7 A 分子名称: Alpha-mannosidase, ZINC ION 著者 Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V. 登録日 2022-03-23 公開日 2022-11-16 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Cryo-EM Structure of Bl_Man38A at 2.7 A Nat.Chem.Biol., 2022
7VQO	Cryo-EM structure of Ams1 bound to the FW domain of Nbr1 分子名称: Ams1, Nbr1 and malE fusion protein, ZINC ION 著者 Zhang, J, Ye, K. 登録日 2021-10-20 公開日 2022-07-06 実験手法 ELECTRON MICROSCOPY (2.19 Å) 主引用文献 Structural mechanism of protein recognition by the FW domain of autophagy receptor Nbr1 Nat Commun, 13, 2022

 

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