PDB: 136 件ウェブページステータス検索Chemie searchBIRD

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6OFR	The crystal structure of the outer membrane transporter YddB from Escherichia coli 分子名称: GLYCEROL, MAGNESIUM ION, TonB-dependent outer membrane receptor, ... 著者 Grinter, R. 登録日 2019-04-01 公開日 2019-10-02 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Protease-associated import systems are widespread in Gram-negative bacteria. Plos Genet., 15, 2019
4ZGV	The Crystal Structure of the Ferredoxin Receptor FusA from Pectobacterium atrosepticum SCRI1043 分子名称: Ferredoxin receptor, LAURYL DIMETHYLAMINE-N-OXIDE, octyl beta-D-glucopyranoside 著者 Grinter, R, Josts, I, Roszak, A.W, Cogdell, R.J, Walker, D. 登録日 2015-04-24 公開日 2016-08-31 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structure of the bacterial plant-ferredoxin receptor FusA. Nat Commun, 7, 2016
8P97	BtuB3G3 bound to cyanocobalamin with disordered EL8 分子名称: CYANOCOBALAMIN, Putative surface layer protein, TonB-dependent receptor 著者 Silale, A, Abellon-Ruiz, J, van den Berg, B. 登録日 2023-06-05 公開日 2023-08-16 最終更新日 2023-09-20 実験手法 ELECTRON MICROSCOPY (2.75 Å) 主引用文献 BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides. Nat Commun, 14, 2023
8P98	BtuB3G3 bound to cyanocobalamin with ordered EL8 分子名称: CYANOCOBALAMIN, Putative surface layer protein, Vitamin B12 transporter BtuB 著者 Silale, A, Abellon-Ruiz, J, van den Berg, B. 登録日 2023-06-05 公開日 2023-08-16 最終更新日 2023-09-20 実験手法 ELECTRON MICROSCOPY (2.97 Å) 主引用文献 BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides. Nat Commun, 14, 2023
5FQ6	Crystal structure of the SusCD complex BT2261-2264 from Bacteroides thetaiotaomicron 分子名称: 3-decanoyloxypropyl decanoate, BT_2261, CALCIUM ION, ... 著者 Glenwright, A.J, Pothula, K.R, Chorev, D.S, Basle, A, Robinson, C.V, Kleinekathoefer, U, Bolam, D.N, van den Berg, B. 登録日 2015-12-07 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis for nutrient acquisition by dominant members of the human gut microbiota. Nature, 541, 2017
5FQ8	Crystal structure of the SusCD complex BT2261-2264 from Bacteroides thetaiotaomicron 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 3-decanoyloxypropyl decanoate, BT_2262 (UNCHARACTERISED LIPOPROTEIN), ... 著者 Glenwright, A.J, Pothula, K.R, Chorev, D.S, Basle, A, Robinson, C.V, Kleinekathoefer, U, Bolam, D.N, van den Berg, B. 登録日 2015-12-07 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Structural basis for nutrient acquisition by dominant members of the human gut microbiota. Nature, 541, 2017
5FQ7	Crystal structure of the SusCD complex BT2261-2264 from Bacteroides thetaiotaomicron 分子名称: BT_2261, BT_2262, BT_2263, ... 著者 Glenwright, A.J, Pothula, K.R, Chorev, D.S, Basle, A, Robinson, C.V, Kleinekathoefer, U, Bolam, D.N, van den Berg, B. 登録日 2015-12-07 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural basis for nutrient acquisition by dominant members of the human gut microbiota. Nature, 541, 2017
8AA4	SusC components of the dextran utilisation system (utilisome) 分子名称: SusC homolog 著者 White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. 登録日 2022-06-29 公開日 2023-06-07 最終更新日 2023-06-21 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes. Nature, 618, 2023
8THE	Cryo-EM structure of Pseudomonas aeruginosa TonB-dependent transporter PhuR in complex with synthetic antibody and heme 分子名称: (2~{R},4~{R},5~{S},6~{S})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[[(2~{R},3~{S},4~{S},5~{R},6~{S})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{R},4~{R},5~{S},6~{S})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{S})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-4,5-bis(oxidanyl)oxane-2-carboxylic acid, Heme/hemoglobin uptake outer membrane receptor PhuR, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Knejski, P, Erramilli, S.K, Kossiakoff, A.A. 登録日 2023-07-15 公開日 2024-01-31 最終更新日 2024-04-17 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Chaperone-assisted cryo-EM structure of P. aeruginosa PhuR reveals molecular basis for heme binding. Structure, 32, 2024
6V81	The crystal structure of the outer-membrane transporter YncD 分子名称: CALCIUM ION, Probable TonB-dependent receptor YncD, octyl beta-D-glucopyranoside 著者 Grinter, R. 登録日 2019-12-10 公開日 2020-05-06 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.957 Å) 主引用文献 The crystal structure of the TonB-dependent transporter YncD reveals a positively charged substrate-binding site. Acta Crystallogr D Struct Biol, 76, 2020
2O5P	Crystal structure of the full length ferric pyoverdine outer membrane receptor FpvA of Pseudomonas aeruginosa in its apo form 分子名称: 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, Ferripyoverdine receptor, PHOSPHATE ION 著者 Cobessi, D. 登録日 2006-12-06 公開日 2007-10-30 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.77 Å) 主引用文献 A beta strand lock exchange for signal transduction in TonB-dependent transducers on the basis of a common structural motif. Structure, 15, 2007
5ODW	Structure of the FpvAI-pyocin S2 complex 分子名称: Ferripyoverdine receptor, Pyocin-S2, SULFATE ION 著者 White, P, Joshi, A, Kleanthous, C. 登録日 2017-07-06 公開日 2017-11-08 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Exploitation of an iron transporter for bacterial protein antibiotic import. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1BY3	FHUA FROM E. COLI 分子名称: N-OCTYL-2-HYDROXYETHYL SULFOXIDE, PROTEIN (FERRICHROME-IRON RECEPTOR PRECURSOR (FHUA)) 著者 Locher, K.P, Rees, B, Koebnik, R, Mitschler, A, Moulinier, L, Rosenbusch, J.P, Moras, D. 登録日 1998-10-22 公開日 1999-01-13 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.74 Å) 主引用文献 Transmembrane signaling across the ligand-gated FhuA receptor: crystal structures of free and ferrichrome-bound states reveal allosteric changes. Cell(Cambridge,Mass.), 95, 1998
5T3R	Crystal structure of BT1762-1763 分子名称: MAGNESIUM ION, SODIUM ION, SusC homolog, ... 著者 van den Berg, B. 登録日 2016-08-26 公開日 2016-12-14 最終更新日 2019-10-16 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural basis for nutrient acquisition by dominant members of the human gut microbiota. Nature, 541, 2017
1BY5	FHUA FROM E. COLI, WITH ITS LIGAND FERRICHROME 分子名称: FE (III) ION, FERRIC HYDROXAMATE UPTAKE PROTEIN, FERRICHROME, ... 著者 Locher, K.P, Rees, B, Koebnik, R, Mitschler, A, Moulinier, L, Rosenbusch, J.P, Moras, D. 登録日 1998-10-23 公開日 1999-01-13 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Transmembrane signaling across the ligand-gated FhuA receptor: crystal structures of free and ferrichrome-bound states reveal allosteric changes. Cell(Cambridge,Mass.), 95, 1998
5T4Y	Crystal structure of BT1762-1763 分子名称: MAGNESIUM ION, SusC homolog, SusD homolog 著者 van den Berg, B. 登録日 2016-08-30 公開日 2016-12-14 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural basis for nutrient acquisition by dominant members of the human gut microbiota. Nature, 541, 2017
5OUT	CRYSTAL STRUCTURE OF THE FERRIC ENTEROBACTIN RECEPTOR (PFEA) MUTANT (G324V) FROM PSEUDOMONAS AERUGINOSA 分子名称: Ferric enterobactin receptor 著者 Moynie, L, Naismith, J.H. 登録日 2017-08-24 公開日 2018-09-05 最終更新日 2019-08-28 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The complex of ferric-enterobactin with its transporter from Pseudomonas aeruginosa suggests a two-site model. Nat Commun, 10, 2019
7NSU	ColicinE9 intact translocation complex 分子名称: Colicin-E9, Outer membrane protein F, Tol-Pal system protein TolB, ... 著者 Webby, M.N, Kleanthous, C, Lukoyanova, N, Housden, N.G. 登録日 2021-03-08 公開日 2021-08-11 最終更新日 2021-11-17 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Porin threading drives receptor disengagement and establishes active colicin transport through Escherichia coli OmpF. Embo J., 40, 2021
7OBW	Crystal structure of the ferric enterobactin receptor (PfeA) from Pseudomonas aeruginosa in complex with TCV-L6 分子名称: FE (III) ION, Ferric enterobactin receptor, [4-[[[(2~{S})-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-[[(2~{S})-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-[2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]ethanoylamino]propanoyl]amino]propanoyl]amino]methyl]-1,2,3-triazol-1-yl]methyl 4-[4-[(5~{S})-5-(acetamidomethyl)-2-oxidanylidene-1,3-oxazolidin-3-yl]-2-fluoranyl-phenyl]piperazine-1-carboxylate 著者 Moynie, L, Naismith, J.H. 登録日 2021-04-23 公開日 2021-08-04 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.66 Å) 主引用文献 Hijacking of the Enterobactin Pathway by a Synthetic Catechol Vector Designed for Oxazolidinone Antibiotic Delivery in Pseudomonas aeruginosa . Acs Infect Dis., 8, 2022
1KMP	Crystal structure of the Outer Membrane Transporter FecA Complexed with Ferric Citrate 分子名称: CITRIC ACID, FE (III) ION, IRON(III) DICITRATE TRANSPORT PROTEIN FECA, ... 著者 Ferguson, A.D, Chakraborty, R, Smith, B.S, Esser, L, van der Helm, D, Deisenhofer, J. 登録日 2001-12-17 公開日 2002-03-06 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis of gating by the outer membrane transporter FecA. Science, 295, 2002
1KMO	Crystal structure of the Outer Membrane Transporter FecA 分子名称: HEPTANE-1,2,3-TRIOL, Iron(III) dicitrate transport protein fecA, LAURYL DIMETHYLAMINE-N-OXIDE 著者 Ferguson, A.D, Chakraborty, R, Smith, B.S, Esser, L, van der Helm, D, Deisenhofer, J. 登録日 2001-12-17 公開日 2002-03-06 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis of gating by the outer membrane transporter FecA. Science, 295, 2002
8B43	Crystal structure of ferrioxamine transporter 分子名称: 1,12-bis(oxidanyl)-1,6,12,17-tetrazacyclodocosane-2,5,13,16-tetrone, FE (III) ION, Ferrichrome-iron receptor, ... 著者 Josts, I, Tidow, H. 登録日 2022-09-19 公開日 2023-04-26 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Interactions of TonB-dependent transporter FoxA with siderophores and antibiotics that affect binding, uptake, and signal transduction. Proc.Natl.Acad.Sci.USA, 120, 2023
3M8D	Crystal structure of spin-labeled BtuB V10R1 with bound calcium and cyanocobalamin 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CALCIUM ION, CYANOCOBALAMIN, ... 著者 Freed, D.M, Horanyi, P.S, Wiener, M.C, Cafiso, D.S. 登録日 2010-03-17 公開日 2010-09-15 最終更新日 2021-08-18 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 Conformational exchange in a membrane transport protein is altered in protein crystals. Biophys.J., 99, 2010
8BLW	Vitamin B12 transporter BtuB1 with lipoprotein BtuG1 from B. theta 分子名称: Vitamin B12 transporter BtuB1, YncE family protein, beta-D-galactopyranose 著者 Silale, A, Abellon-Ruiz, J, van den Berg, B. 登録日 2022-11-10 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (3.22 Å) 主引用文献 BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides. Nat Commun, 14, 2023
4RDR	Structure of the bacterial Zn-transporter ZnuD from Neisseria meningitidis (locked conformation bound to zinc and cadmium ions) 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-ETHANEDIOL, CADMIUM ION, ... 著者 Calmettes, C, Moraes, T.F. 登録日 2014-09-19 公開日 2015-08-19 最終更新日 2015-09-16 実験手法 X-RAY DIFFRACTION (2.472 Å) 主引用文献 The molecular mechanism of Zinc acquisition by the neisserial outer-membrane transporter ZnuD. Nat Commun, 6, 2015

 

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