PDB: 135 件ウェブページステータス検索Chemie searchBIRD

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7DBO	DPBB domain of VCP-like ATPase from Thermoplasma acidophilum 分子名称: SULFATE ION, VCP-like ATPase 著者 Yagi, S, Tagami, S. 登録日 2020-10-21 公開日 2021-09-29 最終更新日 2021-11-17 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc., 143, 2021
7DG7	DPBB domain of VCP-like ATPase from Methanopyrus kandleri 分子名称: ATPase of the AAA+ class, IMIDAZOLE, ZINC ION 著者 Yagi, S, Tagami, S. 登録日 2020-11-11 公開日 2021-09-29 最終更新日 2021-11-17 実験手法 X-RAY DIFFRACTION (1.604 Å) 主引用文献 Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc., 143, 2021
7DG9	DPBB domain of VCP-like ATPase from Aeropyrum pernix 分子名称: Cell division control protein 48, AAA family, ZINC ION 著者 Yagi, S, Tagami, S. 登録日 2020-11-11 公開日 2021-09-29 最終更新日 2021-11-17 実験手法 X-RAY DIFFRACTION (1.602 Å) 主引用文献 Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc., 143, 2021
4RV0	Crystal structure of TN complex 分子名称: Nuclear protein localization protein 4 homolog, SULFATE ION, Transitional endoplasmic reticulum ATPase TER94 著者 Hao, Q, Jiao, S, Shi, Z.B, Zhou, Z.C. 登録日 2014-11-23 公開日 2015-11-25 実験手法 X-RAY DIFFRACTION (1.998 Å) 主引用文献 Crystal structure of TN complex To be Published
3TIW	Crystal structure of p97N in complex with the C-terminus of gp78 分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase AMFR, Transitional endoplasmic reticulum ATPase 著者 Haenzelmann, P, Schindelin, H. 登録日 2011-08-22 公開日 2011-09-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.802 Å) 主引用文献 The Structural and Functional Basis of the p97/Valosin-containing Protein (VCP)-interacting Motif (VIM): MUTUALLY EXCLUSIVE BINDING OF COFACTORS TO THE N-TERMINAL DOMAIN OF p97. J.Biol.Chem., 286, 2011
2PJH	Strctural Model of the p97 N domain- npl4 UBD complex 分子名称: Nuclear protein localization protein 4 homolog, Transitional endoplasmic reticulum ATPase 著者 Isaacson, R, Pye, V.E, Simpson, S, Meyer, H.H, Zhang, X, Freemont, P. 登録日 2007-04-16 公開日 2007-05-08 最終更新日 2022-03-16 実験手法 SOLUTION NMR 主引用文献 Detailed structural insights into the p97-Npl4-Ufd1 interface. J.Biol.Chem., 282, 2007
4KDI	Crystal structure of p97/VCP N in complex with OTU1 UBXL 分子名称: Transitional endoplasmic reticulum ATPase, Ubiquitin thioesterase OTU1 著者 Kim, S.J, Kim, E.E. 登録日 2013-04-25 公開日 2014-03-19 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Structural Basis for Ovarian Tumor Domain-containing Protein 1 (OTU1) Binding to p97/Valosin-containing Protein (VCP). J.Biol.Chem., 289, 2014
1CZ5	NMR STRUCTURE OF VAT-N: THE N-TERMINAL DOMAIN OF VAT (VCP-LIKE ATPASE OF THERMOPLASMA) 分子名称: VCP-LIKE ATPASE 著者 Coles, M, Diercks, T, Liermann, J, Groeger, A, Rockel, B, Baumeister, W, Koretke, K, Lupas, A, Peters, J, Kessler, H. 登録日 1999-09-01 公開日 1999-10-12 最終更新日 2022-02-16 実験手法 SOLUTION NMR 主引用文献 The solution structure of VAT-N reveals a 'missing link' in the evolution of complex enzymes from a simple betaalphabetabeta element. Curr.Biol., 9, 1999
1CZ4	NMR STRUCTURE OF VAT-N: THE N-TERMINAL DOMAIN OF VAT (VCP-LIKE ATPASE OF THERMOPLASMA) 分子名称: VCP-LIKE ATPASE 著者 Coles, M, Diercks, T, Liermann, J, Groeger, A, Rockel, B, Baumeister, W, Koretke, K, Lupas, A, Peters, J, Kessler, H. 登録日 1999-09-01 公開日 1999-10-12 最終更新日 2022-02-16 実験手法 SOLUTION NMR 主引用文献 The solution structure of VAT-N reveals a 'missing link' in the evolution of complex enzymes from a simple betaalphabetabeta element. Curr.Biol., 9, 1999
4KDL	Crystal structure of p97/VCP N in complex with OTU1 UBXL 分子名称: Transitional endoplasmic reticulum ATPase, Ubiquitin thioesterase OTU1 著者 Kim, S.J, Kim, E.E. 登録日 2013-04-25 公開日 2014-03-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Structural Basis for Ovarian Tumor Domain-containing Protein 1 (OTU1) Binding to p97/Valosin-containing Protein (VCP). J.Biol.Chem., 289, 2014
1QCS	N-TERMINAL DOMAIN OF N-ETHYLMALEIMIDE SENSITIVE FACTOR (NSF) 分子名称: N-ETHYLMALEIMIDE SENSITIVE FACTOR (NSF-N), SULFATE ION 著者 Yu, R.C, Jahn, R, Brunger, A.T. 登録日 1999-05-14 公開日 1999-05-18 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 NSF N-terminal domain crystal structure: models of NSF function. Mol.Cell, 4, 1999
1QDN	AMINO TERMINAL DOMAIN OF THE N-ETHYLMALEIMIDE SENSITIVE FUSION PROTEIN (NSF) 分子名称: BETA-MERCAPTOETHANOL, PROTEIN (N-ETHYLMALEIMIDE SENSITIVE FUSION PROTEIN (NSF)), SULFATE ION 著者 May, A.P, Misura, K.M.S, Whiteheart, S.W, Weis, W.I. 登録日 1999-05-21 公開日 1999-06-21 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the amino-terminal domain of N-ethylmaleimide-sensitive fusion protein. Nat.Cell Biol., 1, 1999
3QQ7	Crystal Structure of the p97 N-terminal domain 分子名称: CHLORIDE ION, COBALT (II) ION, GLYCEROL, ... 著者 Haenzelmann, P, Schindelin, H. 登録日 2011-02-15 公開日 2011-06-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Hierarchical Binding of Cofactors to the AAA ATPase p97. Structure, 19, 2011
5GLF	Structural insights into the interaction of p97 N-terminal domain and SHP motif in Derlin-1 rhomboid pseudoprotease 分子名称: Derlin-1, Transitional endoplasmic reticulum ATPase 著者 Lim, J.J, Lee, Y, Yoon, S.Y, Ly, T.T, Kang, J.Y, Youn, H.-S, An, J.Y, Lee, J.-G, Park, K.R, Kim, T.G, Yang, J.K, Jun, Y, Eom, S.H. 登録日 2016-07-11 公開日 2016-11-09 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural insights into the interaction of human p97 N-terminal domain and SHP motif in Derlin-1 rhomboid pseudoprotease. FEBS Lett., 590, 2016
5B6C	Structural Details of Ufd1 binding to p97 分子名称: Peptide from Ubiquitin fusion degradation protein 1 homolog, Transitional endoplasmic reticulum ATPase 著者 Le, L.T.M, Yang, J.K. 登録日 2016-05-26 公開日 2017-01-04 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural Details of Ufd1 Binding to p97 and Their Functional Implications in ER-Associated Degradation PLoS ONE, 11, 2016
5EPP	Structural Insights into the Interaction of p97 N-terminus Domain and VBM Motif in Rhomboid Protease, RHBDL4 分子名称: Rhomboid-related protein 4, Transitional endoplasmic reticulum ATPase 著者 Lim, J.J, Lee, Y, Ly, T.T, Kang, J.Y, Lee, J.-G, An, J.Y, Youn, H.-S, Park, K.R, Kim, T.G, Yang, J.K, Jun, Y, Eom, S.H. 登録日 2015-11-12 公開日 2016-09-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Structural insights into the interaction of p97 N-terminus domain and VBM in rhomboid protease, RHBDL4. Biochem.J., 473, 2016
6CHS	Cdc48-Npl4 complex in the presence of ATP-gamma-S 分子名称: MAGNESIUM ION, Npl4, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Kim, K.H, Bodnar, N.O, Walz, T, Rapoport, T.A. 登録日 2018-02-22 公開日 2018-07-04 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structure of the Cdc48 ATPase with its ubiquitin-binding cofactor Ufd1-Npl4. Nat. Struct. Mol. Biol., 25, 2018
5X4L	Crystal structure of the UBX domain of human UBXD7 in complex with p97 N domain 分子名称: Transitional endoplasmic reticulum ATPase, UBX domain-containing protein 7 著者 Jiang, T, Li, Z, Wang, Y, Xu, M. 登録日 2017-02-13 公開日 2017-03-22 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.402 Å) 主引用文献 Crystal structures of the UBX domain of human UBXD7 and its complex with p97 ATPase Biochem. Biophys. Res. Commun., 486, 2017
4KLN	Structure of p97 N-D1 A232E mutant in complex with ATPgS 分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase 著者 Xia, D, Tang, W.K. 登録日 2013-05-07 公開日 2013-11-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.62 Å) 主引用文献 Altered Intersubunit Communication Is the Molecular Basis for Functional Defects of Pathogenic p97 Mutants. J.Biol.Chem., 288, 2013
8HRZ	Crystal structure of the p97-N/D1 hexamer in complex with six p47-UBX domains 分子名称: ADENOSINE-5'-DIPHOSPHATE, NSFL1 cofactor p47, Transitional endoplasmic reticulum ATPase 著者 Nguyen, T.Q, Kang, W. 登録日 2022-12-16 公開日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structure of the p97-N/D1 hexmaer in complex with six p47-UBX domains To Be Published
5KIW	p97 ND1-L198W in complex with VIMP 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Selenoprotein S, ... 著者 Tang, W.K, Xia, D. 登録日 2016-06-17 公開日 2018-03-07 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.41 Å) 主引用文献 Structural basis for nucleotide-modulated p97 association with the ER membrane. Cell Discov, 3, 2017
5KIY	p97 ND1-A232E in complex with VIMP 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Selenoprotein S, ... 著者 Tang, W.K, Xia, D. 登録日 2016-06-17 公開日 2017-12-20 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Structural basis for nucleotide-modulated p97 association with the ER membrane. Cell Discov, 3, 2017
8OOI	Full composite cryo-EM map of p97/VCP in ADP.Pi state 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Cheng, T.C, Sakata, E, Schuetz, A.K. 登録日 2023-04-05 公開日 2024-01-31 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (2.61 Å) 主引用文献 Characterizing ATP processing by the AAA+ protein p97 at the atomic level. Nat.Chem., 16, 2024
1E32	Structure of the N-Terminal domain and the D1 AAA domain of membrane fusion ATPase p97 分子名称: ADENOSINE-5'-DIPHOSPHATE, P97 著者 Zhang, X, Shaw, A, Bates, P.A, Gorman, M.A, Kondo, H, Dokurno, P, Leonard M, G, Sternberg, J.E, Freemont, P.S. 登録日 2000-06-05 公開日 2001-05-31 最終更新日 2019-07-24 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structure of the Aaa ATPase P97 Mol.Cell, 6, 2000
3CF2	Structure of P97/vcp in complex with ADP/AMP-PNP 分子名称: ADENOSINE-5'-DIPHOSPHATE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase 著者 Davies, J.M, Delabarre, B, Brunger, A.T, Weis, W.I. 登録日 2008-03-01 公開日 2008-04-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Improved structures of full-length p97, an AAA ATPase: implications for mechanisms of nucleotide-dependent conformational change. Structure, 16, 2008

 

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