PDB: 36 件ウェブページステータス検索Chemie searchBIRD

---

7VWO	TA complex from Mycobacterium tuberculosis 分子名称: Antitoxin VapB43, Ribonuclease VapC43 著者 Eun, H.-J, Lee, B.-J, Lee, J.-Y. 登録日 2021-11-11 公開日 2022-11-16 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 TA complex from Mycobacterium tuberculosis To Be Published
6SD6	Structure of VapBC from Shigella sonnei 分子名称: Antitoxin, tRNA(fMet)-specific endonuclease VapC 著者 Lea, S.M, Hollingshead, S. 登録日 2019-07-26 公開日 2020-08-26 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 Polymorphisms in the VapBC toxin:antitoxin system mediate high frequency plasmid loss in Shigella sonnei To Be Published
5K8J	Structure of Caulobacter crescentus VapBC1 (apo form) 分子名称: GLYCEROL, Ribonuclease VapC, VapB family protein 著者 Bendtsen, K.L, Xu, K, Luckmann, M, Brodersen, D.E. 登録日 2016-05-30 公開日 2016-12-28 最終更新日 2018-01-17 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Toxin inhibition in C. crescentus VapBC1 is mediated by a flexible pseudo-palindromic protein motif and modulated by DNA binding. Nucleic Acids Res., 45, 2017
5SV2	Toxin VapC21 from Mycobacterium tuberculosis 分子名称: Ribonuclease VapC21 著者 Valadares, N.F. 登録日 2016-08-04 公開日 2016-09-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.31 Å) 主引用文献 Crystal structure of VapC21 from Mycobacterium tuberculosis at 1.31 angstrom resolution. Biochem.Biophys.Res.Commun., 478, 2016
5L6M	Structure of Caulobacter crescentus VapBC1 (VapB1deltaC:VapC1 form) 分子名称: GLYCEROL, MALONATE ION, Ribonuclease VapC, ... 著者 Bendtsen, K.L, Xu, K, Luckmann, M, Brodersen, D.E. 登録日 2016-05-30 公開日 2016-12-28 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Toxin inhibition in C. crescentus VapBC1 is mediated by a flexible pseudo-palindromic protein motif and modulated by DNA binding. Nucleic Acids Res., 45, 2017
5L6L	Structure of Caulobacter crescentus VapBC1 bound to operator DNA 分子名称: DNA (27-MER), Ribonuclease VapC, VapB family protein 著者 Bendtsen, K.L, Xu, K, Luckmann, M, Brodersen, D.E. 登録日 2016-05-30 公開日 2016-12-28 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Toxin inhibition in C. crescentus VapBC1 is mediated by a flexible pseudo-palindromic protein motif and modulated by DNA binding. Nucleic Acids Res., 45, 2017
2H1C	Crystal Structure of FitAcB from Neisseria gonorrhoeae 分子名称: ACETATE ION, MAGNESIUM ION, SULFATE ION, ... 著者 Mattison, K, Wilbur, J.S, So, M, Brennan, R.G. 登録日 2006-05-16 公開日 2006-09-26 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of FitAB from Neisseria gonorrhoeae bound to DNA reveals a tetramer of toxin-antitoxin heterodimers containing pin domains and ribbon-helix-helix motifs. J.Biol.Chem., 281, 2006
2H1O	Structure of FitAB bound to IR36 DNA fragment 分子名称: IR36-strand 1, IR36-strand 2, Trafficking protein A, ... 著者 Mattison, K, Wilbur, J.S, So, M, Brennan, R.G. 登録日 2006-05-16 公開日 2006-09-26 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of FitAB from Neisseria gonorrhoeae bound to DNA reveals a tetramer of toxin-antitoxin heterodimers containing pin domains and ribbon-helix-helix motifs. J.Biol.Chem., 281, 2006
6IFM	Crystal structure of DNA bound VapBC from Salmonella typhimurium 分子名称: Antitoxin VapB, DNA backward (27-MER), DNA forward (27-MER), ... 著者 Park, D.W, Lee, B.J. 登録日 2018-09-20 公開日 2020-01-29 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.804 Å) 主引用文献 Crystal structure of proteolyzed VapBC and DNA-bound VapBC from Salmonella enterica Typhimurium LT2 and VapC as a putative Ca2+-dependent ribonuclease. Faseb J., 34, 2020
6IFC	Crystal structure of VapBC from Salmonella typhimurium 分子名称: Antitoxin VapB, CALCIUM ION, tRNA(fMet)-specific endonuclease VapC 著者 Park, D.W, Lee, B.J. 登録日 2018-09-19 公開日 2020-01-29 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Crystal structure of proteolyzed VapBC and DNA-bound VapBC from Salmonella enterica Typhimurium LT2 and VapC as a putative Ca2+-dependent ribonuclease. Faseb J., 34, 2020
3IX7	Crystal structure of a domain of functionally unknown protein from Thermus thermophilus HB8 分子名称: ACETIC ACID, Uncharacterized protein TTHA0540 著者 Chang, C, Li, H, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2009-09-03 公開日 2009-09-22 最終更新日 2017-11-01 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal structure of a domain of functionally unknown protein from Thermus thermophilus HB8 To be Published
3TND	Crystal structure of Shigella flexneri VapBC toxin-antitoxin complex 分子名称: Antitoxin VapB, SODIUM ION, SULFATE ION, ... 著者 Dienemann, C, Boggild, A, Winther, K.S, Gerdes, K, Brodersen, D.E. 登録日 2011-09-01 公開日 2011-11-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal Structure of the VapBC Toxin-Antitoxin Complex from Shigella flexneri Reveals a Hetero-Octameric DNA-Binding Assembly. J.Mol.Biol., 414, 2011
3I8O	A domain of a functionally unknown protein from Methanocaldococcus jannaschii DSM 2661. 分子名称: ACETATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Tan, K, Chhor, G, Cobb, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2009-07-09 公開日 2009-07-21 最終更新日 2019-07-24 実験手法 X-RAY DIFFRACTION (2.638 Å) 主引用文献 A domain of a functionally unknown protein from Methanocaldococcus jannaschii DSM 2661. To be Published
2BSQ	FitAB bound to DNA 分子名称: IR36, FORWARD STRAND, REVERSE STRAND, ... 著者 Mattison, K, Wilbur, J.S, So, M, Brennan, R.G. 登録日 2005-05-23 公開日 2006-08-24 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of Fitab from Neisseria Gonorrhoeae Bound to DNA Reveals a Tetramer of Toxin-Antitoxin Heterodimers Containing Pin Domains and Ribbon-Helix-Helix Motifs. J.Biol.Chem., 281, 2006
3ZVK	Crystal structure of VapBC2 from Rickettsia felis bound to a DNA fragment from their promoter 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ANTITOXIN OF TOXIN-ANTITOXIN SYSTEM VAPB, DNA, ... 著者 Mate, M.J, Ortiz-Lombardia, M, Cambillau, C. 登録日 2011-07-25 公開日 2011-12-14 最終更新日 2012-04-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of the DNA-Bound Vapbc2 Antitoxin/Toxin Pair from Rickettsia Felis. Nucleic Acids Res., 40, 2012
2FE1	Crystal Structure of PAE0151 from Pyrobaculum aerophilum 分子名称: CALCIUM ION, CHLORIDE ION, MANGANESE (II) ION, ... 著者 Bunker, R.D, Baker, E.N, Arcus, V.L. 登録日 2005-12-15 公開日 2005-12-27 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of PAE0151 from Pyrobaculum aerophilum, a PIN-domain (VapC) protein from a toxin-antitoxin operon. Proteins, 72, 2008
5WZF	Crystal structure of Mycobacterium tuberculosis VapC20 (Rv2549c), Sarcin-Ricin loop cleaving toxin 分子名称: 23S rRNA-specific endonuclease VapC20 著者 Thakur, K.G, Deep, A. 登録日 2017-01-17 公開日 2017-10-25 最終更新日 2023-03-01 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal structure of Mycobacterium tuberculosis VapC20 toxin and its interactions with cognate antitoxin, VapB20, suggest a model for toxin-antitoxin assembly. FEBS J., 284, 2017
5WZ4	Crystal structure of Mycobacterium tuberculosis VapC20 (Rv2549c), Sarcin-Ricin loop cleaving toxin 分子名称: 23S rRNA-specific endonuclease VapC20 著者 Thakur, K.G, Deep, A. 登録日 2017-01-17 公開日 2017-10-25 最終更新日 2023-03-01 実験手法 X-RAY DIFFRACTION (1.775 Å) 主引用文献 Crystal structure of Mycobacterium tuberculosis VapC20 toxin and its interactions with cognate antitoxin, VapB20, suggest a model for toxin-antitoxin assembly. FEBS J., 284, 2017
5ECD	Structure of the Shigella flexneri VapC mutant D98N crystal form 1 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, tRNA(fMet)-specific endonuclease VapC 著者 Xu, K. 登録日 2015-10-20 公開日 2016-02-17 最終更新日 2018-01-17 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structural analysis of the active site architecture of the VapC toxin from Shigella flexneri. Proteins, 84, 2016
1V8P	Crystal structure of PAE2754 from Pyrobaculum aerophilum 分子名称: CHLORIDE ION, hypothetical protein PAE2754 著者 Arcus, V.L, Backbro, K, Roos, A, Daniel, E.L, Baker, E.N. 登録日 2004-01-12 公開日 2004-02-10 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Distant structural homology leads to the functional characterization of an archaeal PIN domain as an exonuclease J.Biol.Chem., 279, 2004
5ED0	Structure of the Shigella flexneri VapC mutant D7N 分子名称: tRNA(fMet)-specific endonuclease VapC 著者 Xu, K, Dedic, E, Brodersen, D.E. 登録日 2015-10-20 公開日 2016-02-17 最終更新日 2020-03-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural analysis of the active site architecture of the VapC toxin from Shigella flexneri. Proteins, 84, 2016
5ECY	Structure of the Shigella flexneri VapC mutant D98N crystal form 2 分子名称: tRNA(fMet)-specific endonuclease VapC 著者 Xu, K, Dedic, E, Brodersen, D.E. 登録日 2015-10-20 公開日 2016-10-19 最終更新日 2018-01-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural analysis on the active site architecture of an activated VapC toxin from Shigella flexneri to be published
5ECW	Structure of the Shigella flexneri VapC mutant D7A 分子名称: tRNA(fMet)-specific endonuclease VapC 著者 Xu, K, Dedic, E, Brodersen, D.E. 登録日 2015-10-20 公開日 2016-02-17 最終更新日 2018-01-17 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Structural analysis of the active site architecture of the VapC toxin from Shigella flexneri. Proteins, 84, 2016
1V8O	Crystal Structure of PAE2754 from Pyrobaculum aerophilum 分子名称: CHLORIDE ION, hypothetical protein PAE2754 著者 Arcus, V.L, Backbro, K, Roos, A, Daniel, E.L, Baker, E.N. 登録日 2004-01-12 公開日 2004-02-10 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Distant structural homology leads to the functional characterization of an archaeal PIN domain as an exonuclease J.Biol.Chem., 279, 2004
1W8I	The Structure of gene product af1683 from Archaeoglobus fulgidus. 分子名称: PUTATIVE VAPC RIBONUCLEASE AF_1683 著者 Midwest Center for Structural Genomics (MCSG), Cuff, M.E, Zhang, R, Ginell, S.L, Xu, X, Savchenko, A, Edwards, A, Joachimiak, A. 登録日 2004-09-22 公開日 2004-11-16 最終更新日 2017-06-28 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The Structure of Gene Product Af1683 from Archaeoglobus Fulgidus To be Published

 

12>