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1YKD
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BU of 1ykd by Molmil
Crystal Structure of the Tandem GAF Domains from a Cyanobacterial Adenylyl Cyclase: Novel Modes of Ligand-Binding and Dimerization
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, adenylate cyclase
著者Martinez, S.E, Bruder, S, Schultz, A, Zheng, N, Schultz, J.E, Beavo, J.A, Linder, J.U.
登録日2005-01-17
公開日2005-02-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the tandem GAF domains from a cyanobacterial adenylyl cyclase: Modes of ligand binding and dimerization
Proc.Natl.Acad.Sci.USA, 102, 2005
5DFY
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BU of 5dfy by Molmil
Structure of the parental state of GAF3 from Slr1393 of Synechocystis sp. PCC6803 (in vitro assembled protein/chromophore)
分子名称: Histidine kinase, PHYCOCYANOBILIN
著者Xu, X.-L, Zhao, K.-H, Gaertner, W, Hoeppner, A.
登録日2015-08-27
公開日2016-09-14
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural elements regulating the photochromicity in a cyanobacteriochrome
Proc.Natl.Acad.Sci.USA, 2020
5DFX
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BU of 5dfx by Molmil
Structure of the parental state of GAF3 from Slr1393 of Synechocystis sp. PCC6803 (in vivo assembled protein/chromophore)
分子名称: Histidine kinase, PHYCOCYANOBILIN
著者Xu, X.-L, Zhao, K.-H, Gaertner, W, Hoeppner, A.
登録日2015-08-27
公開日2016-09-14
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural elements regulating the photochromicity in a cyanobacteriochrome
Proc.Natl.Acad.Sci.USA, 2020
7CKV
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BU of 7ckv by Molmil
Crystal structure of Cyanobacteriochrome GAF domain in Pr state
分子名称: MAGNESIUM ION, PHYCOCYANOBILIN, RcaE
著者Nagae, T, Koizumi, T, Hirose, Y, Mishima, M.
登録日2020-07-19
公開日2021-05-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structural basis of the protochromic green/red photocycle of the chromatic acclimation sensor RcaE.
Proc.Natl.Acad.Sci.USA, 118, 2021
3CI6
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BU of 3ci6 by Molmil
Crystal structure of the GAF domain from Acinetobacter phosphoenolpyruvate-protein phosphotransferase
分子名称: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Cuff, M.E, Shackelford, G, Kim, Y, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2008-03-10
公開日2008-05-13
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of the GAF domain from Acinetobacter phosphoenolpyruvate-protein phosphotransferase.
TO BE PUBLISHED
3DBA
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BU of 3dba by Molmil
Crystal structure of the cGMP-bound GAF a domain from the photoreceptor phosphodiesterase 6C
分子名称: Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', GLYCEROL, GUANOSINE-3',5'-MONOPHOSPHATE
著者Martinez, S.E, Heikaus, C.C, Klevit, R.E, Beavo, J.A.
登録日2008-05-30
公開日2008-07-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献The Structure of the GAF A Domain from Phosphodiesterase 6C Reveals Determinants of cGMP Binding, a Conserved Binding Surface, and a Large cGMP-dependent Conformational Change.
J.Biol.Chem., 283, 2008
5W10
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BU of 5w10 by Molmil
Lcd1 GAF domain in complex with cAMP ligand
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, cGMP-specific phosphodiesterase
著者Guzzo, C.R, Maciel, N.K, Barbosa, A.S, Farah, C.S.
登録日2017-06-01
公開日2017-06-28
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural and Enzymatic Characterization of a cAMP-Dependent Diguanylate Cyclase from Pathogenic Leptospira Species.
J. Mol. Biol., 429, 2017
2K31
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BU of 2k31 by Molmil
Solution Structure of cGMP-binding GAF domain of Phosphodiesterase 5
分子名称: GUANOSINE-3',5'-MONOPHOSPHATE, Phosphodiesterase 5A, cGMP-specific
著者Heikaus, C.C, Stout, J.R, Sekharan, M.R, Eakin, C.M, Rajagopal, P, Brzovic, P.S, Beavo, J.A, Klevit, R.E.
登録日2008-04-16
公開日2008-06-03
最終更新日2021-10-20
実験手法SOLUTION NMR
主引用文献Solution Structure of the cGMP Binding GAF Domain from Phosphodiesterase 5: Insights into Nucleotide Selectivity, Dimerization, and cGMP-Dependent Conformational Change.
J.Biol.Chem., 283, 2008
2K2N
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BU of 2k2n by Molmil
Solution structure of a cyanobacterial phytochrome GAF domain in the red light-absorbing ground state
分子名称: PHYCOCYANOBILIN, Sensor protein
著者Cornilescu, C.C, Cornilescu, G, Ulijasz, A.T, Vierstra, R.D, Markley, J.L.
登録日2008-04-04
公開日2008-09-23
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Solution structure of a cyanobacterial phytochrome GAF domain in the red-light-absorbing ground state.
J.Mol.Biol., 383, 2008
2KLI
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BU of 2kli by Molmil
Structural Basis for the Photoconversion of A Phytochrome to the Activated FAR-RED LIGHT-ABSORBING Form
分子名称: PHYCOCYANOBILIN, Sensor protein
著者Cornilescu, C.C, Cornilescu, G, Ulijasz, A.T, Zhang, J, Rivera, M, Vierstra, R.D, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
登録日2009-07-03
公開日2009-11-03
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structural basis for the photoconversion of a phytochrome to the activated Pfr form
Nature, 463, 2010
2KOI
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BU of 2koi by Molmil
Refined solution structure of a cyanobacterial phytochrome GAF domain in the red light-absorbing ground state
分子名称: PHYCOCYANOBILIN, Sensor protein
著者Cornilescu, C.C, Cornilescu, G, Ulijasz, A.T, Vierstra, R.D, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
登録日2009-09-22
公開日2009-11-03
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Structural basis for the photoconversion of a phytochrome to the activated Pfr form
Nature, 463, 2010
2LB5
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BU of 2lb5 by Molmil
Refined Structural Basis for the Photoconversion of A Phytochrome to the Activated FAR-RED LIGHT-ABSORBING Form
分子名称: PHYCOCYANOBILIN, Sensor histidine kinase
著者Cornilescu, C.C, Cornilescu, G, Ulijasz, A.T, Vierstra, R.D, Markley, J.L.
登録日2011-03-23
公開日2011-06-29
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural basis for the photoconversion of a phytochrome to the activated Pfr form.
Nature, 463, 2010
4BWI
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BU of 4bwi by Molmil
Structure of the phytochrome Cph2 from Synechocystis sp. PCC6803
分子名称: FORMIC ACID, GLUTAMIC ACID, GLYCEROL, ...
著者Anders, K, Angerer, V, Widany, G.D, Mroginski, M.A, von Stetten, D, Essen, L.-O.
登録日2013-07-03
公開日2013-10-30
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the Cyanobacterial Phytochrome 2 Photosensor Implies a Tryptophan Switch for Phytochrome Signaling.
J.Biol.Chem., 288, 2013
3K2N
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BU of 3k2n by Molmil
The crystal structure of sigma-54-dependent transcriptional regulator domain from Chlorobium Tepidum TLS
分子名称: Sigma-54-dependent transcriptional regulator
著者Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2009-09-30
公開日2010-01-19
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of sigma-54-dependent transcriptional regulator domain from Chlorobium
To be Published
2LB9
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BU of 2lb9 by Molmil
Refined solution structure of a cyanobacterial phytochrome gaf domain in the red light-absorbing ground state (corrected pyrrole ring planarity)
分子名称: PHYCOCYANOBILIN, Sensor histidine kinase
著者Cornilescu, C.C, Cornilescu, G, Ulijasz, A.T, Vierstra, R.D, Markley, J.L.
登録日2011-03-23
公開日2011-06-29
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of a cyanobacterial phytochrome GAF domain in the red-light-absorbing ground state.
J.Mol.Biol., 383, 2008
2M7U
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BU of 2m7u by Molmil
Blue Light-Absorbing State of TePixJ, an Active Cyanobacteriochrome Domain
分子名称: Methyl-accepting chemotaxis protein, Phycoviolobilin, blue light-absorbing form
著者Cornilescu, G, Cornilescu, C.C, Burgie, S.E, Walker, J.M, Markley, J.L, Ulijasz, A.T, Vierstra, R.D.
登録日2013-05-01
公開日2014-01-01
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural and Flexibility Variations Between the Ground and Photoactivated States of a Blue/Green Light-Absorbing Cyanobacteriochrome
To be Published
2M7V
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BU of 2m7v by Molmil
Green Light-Absorbing State of TePixJ, an Active Cyanobacteriochrome Domain
分子名称: Methyl-accepting chemotaxis protein, PHYCOVIOLOBILIN
著者Cornilescu, G, Cornilescu, C.C, Burgie, S.E, Walker, J.M, Markley, J.L, Ulijasz, A.T, Vierstra, R.D.
登録日2013-05-01
公開日2014-01-01
最終更新日2024-03-13
実験手法SOLUTION NMR
主引用文献Structural and Flexibility Variations Between the Ground and Photoactivated States of a Blue/Green Light-Absorbing Cyanobacteriochrome
To be Published
5ZOH
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BU of 5zoh by Molmil
Crystal structure of a far-red light-absorbing form of AnPixJg2_BV4 in complex with biliverdin
分子名称: BILIVERDINE IX ALPHA, GLYCEROL, Methyl-accepting chemotaxis protein
著者Miyazaki, T, Fushimi, K, Narikawa, R.
登録日2018-04-13
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Rational conversion of chromophore selectivity of cyanobacteriochromes to accept mammalian intrinsic biliverdin.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6BHN
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BU of 6bhn by Molmil
Red Light-Absorbing State of NpR6012g4, a Red/Green Cyanobacteriochrome
分子名称: Methyl-accepting chemotaxis sensory transducer with phytochrome sensor, PHYCOCYANOBILIN
著者Yu, Q, Lim, S, Rockwell, N.C, Martin, S.S, Lagarias, J.C, Ames, J.B.
登録日2017-10-31
公開日2018-04-18
最終更新日2019-12-04
実験手法SOLUTION NMR
主引用文献Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BHO
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BU of 6bho by Molmil
Green Light-Absorbing State of NpR6012g4, a Red/Green Cyanobacteriochrome
分子名称: Methyl-accepting chemotaxis sensory transducer with phytochrome sensor, PHYCOCYANOBILIN
著者Lim, S, Yu, Q, Rockwell, N.C, Martin, S.S, Lagarias, J.C, Ames, J.B.
登録日2017-10-31
公開日2018-04-18
最終更新日2019-12-04
実験手法SOLUTION NMR
主引用文献Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2VKS
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BU of 2vks by Molmil
Crystal structure of GAF-B domain of DevS from Mycobacterium smegmatis
分子名称: GAF FAMILY PROTEIN
著者Kang, B.S, Cho, H.Y, Cho, H.J.
登録日2007-12-25
公開日2008-08-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献O2- and No-Sensing Mechanism Through the Devsr Two- Component System in Mycobacterium Smegmatis.
J.Bacteriol., 190, 2008
3LFV
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BU of 3lfv by Molmil
crystal structure of unliganded PDE5A GAF domain
分子名称: cGMP-specific 3',5'-cyclic phosphodiesterase
著者Wang, H, Robinson, H, Ke, H.
登録日2010-01-18
公開日2010-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Conformation changes, N-terminal involvement, and cGMP signal relay in the phosphodiesterase-5 GAF domain.
J.Biol.Chem., 285, 2010
3MF0
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BU of 3mf0 by Molmil
Crystal structure of PDE5A GAF domain (89-518)
分子名称: cGMP-specific 3',5'-cyclic phosphodiesterase
著者Wang, H, Robinson, H, Ke, H.
登録日2010-04-01
公開日2010-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Conformation changes, N-terminal involvement, and cGMP signal relay in the phosphodiesterase-5 GAF domain.
J.Biol.Chem., 285, 2010
4YOF
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BU of 4yof by Molmil
DosS GAFA Domain Reduced Nitric Oxide Bound Crystal Structure
分子名称: NITRIC OXIDE, PROTOPORPHYRIN IX CONTAINING FE, Redox sensor histidine kinase response regulator DevS
著者Madrona, Y.
登録日2015-03-11
公開日2016-03-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Analysis of cytochrome P450 CYP119 ligand-dependent conformational dynamics by two-dimensional NMR and X-ray crystallography.
J.Biol.Chem., 290, 2015
3TRC
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BU of 3trc by Molmil
Structure of the GAF domain from a phosphoenolpyruvate-protein phosphotransferase (ptsP) from Coxiella burnetii
分子名称: PHOSPHATE ION, Phosphoenolpyruvate-protein phosphotransferase, SODIUM ION
著者Cheung, J, Franklin, M.C, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
登録日2011-09-09
公開日2011-09-28
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015

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