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3BWH
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BU of 3bwh by Molmil
Atomic resolution structure of cucurmosin, a novel type 1 RIP from the sarcocarp of Cucurbita moschata
分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, beta-D-xylopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)][alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Chen, L.
登録日2008-01-09
公開日2008-10-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Atomic resolution structure of cucurmosin, a novel type 1 ribosome-inactivating protein from the sarcocarp of Cucurbita moschata.
J.Struct.Biol., 164, 2008
6LOZ
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BU of 6loz by Molmil
crystal structure of alpha-momorcharin in complex with adenine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENINE, Ribosome-inactivating protein momordin I
著者Fan, X, Jin, T.
登録日2020-01-07
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Atomic-resolution structures of type I ribosome inactivating protein alpha-momorcharin with different substrate analogs.
Int.J.Biol.Macromol., 164, 2020
2Z4U
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BU of 2z4u by Molmil
Crystal structure of wild type PD-L4 from Phytolacca dioica leaves
分子名称: 1,2-ETHANEDIOL, Ribosome-inactivating protein PD-L4
著者Ruggiero, A, Berisio, R.
登録日2007-06-26
公開日2008-02-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Atomic resolution (1.1 A) structure of the ribosome-inactivating protein PD-L4 from Phytolacca dioica L. leaves
Proteins, 71, 2008
2QET
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BU of 2qet by Molmil
Structure of the mutant S211A of the ribosome inactivating protein PDL4 from P. dioica in complex with adenine
分子名称: ADENINE, Ribosome-inactivating protein PD-L4
著者Ruggiero, A, Berisio, R.
登録日2007-06-26
公開日2008-02-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Atomic resolution (1.1 A) structure of the ribosome-inactivating protein PD-L4 from Phytolacca dioica L. leaves
Proteins, 71, 2008
2QES
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BU of 2qes by Molmil
Crystal structure of the ribosome inactivating protein PDL4 from P. dioica leaves in complex with adenine
分子名称: ADENINE, Ribosome-inactivating protein PD-L4
著者Ruggiero, A, Berisio, R.
登録日2007-06-26
公開日2008-02-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Atomic resolution (1.1 A) structure of the ribosome-inactivating protein PD-L4 from Phytolacca dioica L. leaves
Proteins, 71, 2008
3MVG
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BU of 3mvg by Molmil
Native structure of IRIP, a type I ribosome inactivating protein from Iris hollandica var. at 1.25 A
分子名称: GLYCEROL, Ribosome inactivating type 1 protein, SULFATE ION
著者Meyer, A, Weber, W, Singh, T.P, Betzel, C.
登録日2010-05-04
公開日2011-06-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Native structure of IRIP, a type I ribosome inactivating protein from Iris hollandica var. at 1.25 A
to be published
7Y08
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BU of 7y08 by Molmil
Crystal structure of Ricin A chain bound with (2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)glycyl-L-phenylalanine
分子名称: N-[(2-amino-4-oxo-1,4-dihydropteridin-7-yl)carbonyl]glycyl-L-phenylalanine, Ricin A chain, SULFATE ION
著者Goto, M, Higashi, S, Ohba, T, Kawata, R, Nagatsu, K, Suzuki, S, Saito, R.
登録日2022-06-03
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Conformational change in ricin toxin A-Chain: A critical factor for inhibitor binding to the secondary pocket.
Biochem.Biophys.Res.Commun., 627, 2022
7Y07
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BU of 7y07 by Molmil
Crystal structure of Ricin A chain bound with (S)-2-amino-N-(1-hydroxy-3-phenylpropan-2-yl)-4-oxo-3,4-dihydropteridine-7-carboxamide
分子名称: 2-azanyl-4-oxidanylidene-N-[(2S)-1-oxidanyl-3-phenyl-propan-2-yl]-3H-pteridine-7-carboxamide, Ricin A chain, SULFATE ION
著者Goto, M, Higashi, S, Ohba, T, Kawata, R, Nagatsu, K, Suzuki, S, Saito, R.
登録日2022-06-03
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Conformational change in ricin toxin A-Chain: A critical factor for inhibitor binding to the secondary pocket.
Biochem.Biophys.Res.Commun., 627, 2022
3PX8
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BU of 3px8 by Molmil
RTA in complex with 7-carboxy-pterin
分子名称: 2-amino-4-oxo-1,4-dihydropteridine-7-carboxylic acid, Preproricin
著者Jasheway, K.R, Robertus, J.D.
登録日2010-12-09
公開日2011-06-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献7-Substituted pterins provide a new direction for ricin A chain inhibitors.
Eur.J.Med.Chem., 46, 2011
2Z53
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BU of 2z53 by Molmil
Crystal structure of the S211A mutant of the ribosome inactivating protein PDL4 from P. dioica leaves
分子名称: 1,2-ETHANEDIOL, Ribosome-inactivating protein PD-L4
著者Berisio, R, Ruggiero, A.
登録日2007-06-27
公開日2008-02-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Atomic resolution (1.1 A) structure of the ribosome-inactivating protein PD-L4 from Phytolacca dioica L. leaves
Proteins, 71, 2008
7XZT
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BU of 7xzt by Molmil
Crystal structure of Ricin A chain bound with (2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)-D-tyrosine
分子名称: (2R)-2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]-3-(4-hydroxyphenyl)propanoic acid, Ricin A chain, SULFATE ION
著者Goto, M, Higashi, S, Ohba, T, Kawata, R, Nagatsu, K, Suzuki, S, Saito, R.
登録日2022-06-03
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Conformational change in ricin toxin A-Chain: A critical factor for inhibitor binding to the secondary pocket.
Biochem.Biophys.Res.Commun., 627, 2022
5Z37
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BU of 5z37 by Molmil
Crystal Structure of Abrin A chain (Recombinant) at 1.3 Angstroms
分子名称: Abrin A-chain, IMIDAZOLE
著者Bansia, H, Karande, A.A, Ramakumar, S.
登録日2018-01-05
公開日2019-01-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural basis for neutralization of cytotoxic abrin by monoclonal antibody D6F10.
FEBS J., 286, 2019
6LOQ
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BU of 6loq by Molmil
crystal structure of alpha-momorcharin in complex with cAMP
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Ribosome-inactivating protein momordin I
著者Fan, X, Jin, T.
登録日2020-01-07
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.331 Å)
主引用文献Atomic-resolution structures of type I ribosome inactivating protein alpha-momorcharin with different substrate analogs.
Int.J.Biol.Macromol., 164, 2020
7TGF
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BU of 7tgf by Molmil
Single-domain VHH intrabodies neutralize ricin toxin.
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Ricin chain A, ...
著者Rudolph, M.J, Mantis, N.
登録日2022-01-07
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.347 Å)
主引用文献Single-domain antibodies neutralize ricin toxin intracellularly by blocking access to ribosomal P-stalk proteins.
J.Biol.Chem., 298, 2022
7Y06
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BU of 7y06 by Molmil
Crystal structure of Ricin A chain bound with (S)-2-(2-amino-4-oxo-3,4-dihydropteridine-7-carboxamido)-4-phenylbutanoic acid
分子名称: (2S)-2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]-4-phenyl-butanoic acid, Ricin A chain, SULFATE ION
著者Goto, M, Higashi, S, Ohba, T, Kawata, R, Nagatsu, K, Suzuki, S, Saito, R.
登録日2022-06-03
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Conformational change in ricin toxin A-Chain: A critical factor for inhibitor binding to the secondary pocket.
Biochem.Biophys.Res.Commun., 627, 2022
7Y03
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BU of 7y03 by Molmil
Crystal structure of Ricin A chain bound with (S)-2-(2-amino-4-oxo-3,4-dihydropteridine-7-carboxamido)-2-phenylacetic acid
分子名称: (2S)-2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]-2-phenyl-ethanoic acid, Ricin A chain, SULFATE ION
著者Goto, M, Higashi, S, Ohba, T, Kawata, R, Nagatsu, K, Suzuki, S, Saito, R.
登録日2022-06-03
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Conformational change in ricin toxin A-Chain: A critical factor for inhibitor binding to the secondary pocket.
Biochem.Biophys.Res.Commun., 627, 2022
4YP2
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BU of 4yp2 by Molmil
Cleavage of nicotinamide adenine dinucleotides by the ribosome inactivating protein from Momordica charantia
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, NICOTINAMIDE, Ribosome-inactivating protein momordin I
著者Vinkovic, M, Hussain, J, Wood, G.E, Gill, R, Wood, S.P.
登録日2015-03-12
公開日2015-05-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Cleavage of nicotinamide adenine dinucleotide by the ribosome-inactivating protein from Momordica charantia.
Acta Crystallogr.,Sect.F, 71, 2015
6LOR
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BU of 6lor by Molmil
crystal structure of alpha-momorcharin in complex with ADP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, Ribosome-inactivating protein momordin I
著者Fan, X, Jin, T.
登録日2020-01-07
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Atomic-resolution structures of type I ribosome inactivating protein alpha-momorcharin with different substrate analogs.
Int.J.Biol.Macromol., 164, 2020
6LOV
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BU of 6lov by Molmil
crystal structure of alpha-momorcharin in complex with xanthosine
分子名称: 2,3-dihydroxanthosine, Ribosome-inactivating protein momordin I
著者Fan, X, Jin, T.
登録日2020-01-07
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Atomic-resolution structures of type I ribosome inactivating protein alpha-momorcharin with different substrate analogs.
Int.J.Biol.Macromol., 164, 2020
6LOY
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BU of 6loy by Molmil
crystal structure of alpha-momorcharin in complex with dAMP
分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Ribosome-inactivating protein momordin I
著者Fan, X, Jin, T.
登録日2020-01-07
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Atomic-resolution structures of type I ribosome inactivating protein alpha-momorcharin with different substrate analogs.
Int.J.Biol.Macromol., 164, 2020
2VC4
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BU of 2vc4 by Molmil
Ricin A-Chain (Recombinant) E177D Mutant
分子名称: GLYCEROL, RICIN A CHAIN, SULFATE ION
著者Marsden, C.J, Fulop, V.
登録日2007-09-18
公開日2007-10-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献The Isolation and Characterisation of Temperature-Dependent Ricin a Chain Molecules in Saccharomyces Cerevisiae
FEBS J., 274, 2007
6LOW
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BU of 6low by Molmil
crystal structure of alpha-momorcharin in complex with GMP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GUANOSINE-5'-MONOPHOSPHATE, Ribosome-inactivating protein momordin I
著者Fan, X, Jin, T.
登録日2020-01-07
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Atomic-resolution structures of type I ribosome inactivating protein alpha-momorcharin with different substrate analogs.
Int.J.Biol.Macromol., 164, 2020
1UQ5
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BU of 1uq5 by Molmil
RICIN A-CHAIN (RECOMBINANT) N122A MUTANT
分子名称: ACETATE ION, RICIN, SULFATE ION
著者Marsden, C.J, Fulop, V.
登録日2003-10-15
公開日2004-01-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The Effect of Mutations Surrounding and within the Active Site on the Catalytic Activity of Ricin a Chain
Eur.J.Biochem., 271, 2004
2OQA
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BU of 2oqa by Molmil
X-ray Sequence and Crystal Structure of Luffaculin 1, a Novel Type 1 Ribosome-inactivating Protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, Luffaculin 1, ...
著者Hou, X, Huang, M.
登録日2007-01-31
公開日2007-05-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献X-ray sequence and crystal structure of luffaculin 1, a novel type 1 ribosome-inactivating protein
Bmc Struct.Biol., 7, 2007
1RL0
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BU of 1rl0 by Molmil
Crystal structure of a new ribosome-inactivating protein (RIP): dianthin 30
分子名称: Antiviral protein DAP-30
著者Fermani, S, Falini, G, Ripamonti, A, Bolognesi, A, Polito, L, Stirpe, F.
登録日2003-11-24
公開日2004-12-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The 1.4A structure of dianthin 30 indicates a role of surface potential at the active site of type 1 ribosome inactivating proteins
J.Struct.Biol., 149, 2005

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