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1AAR
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BU of 1aar by Molmil
STRUCTURE OF A DIUBIQUITIN CONJUGATE AND A MODEL FOR INTERACTION WITH UBIQUITIN CONJUGATING ENZYME (E2)
Descriptor: DI-UBIQUITIN
Authors:Cook, W.J, Jeffrey, L.C, Carson, M, Chen, Z, Pickart, C.M.
Deposit date:1992-04-17
Release date:1993-10-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a diubiquitin conjugate and a model for interaction with ubiquitin conjugating enzyme (E2).
J.Biol.Chem., 267, 1992
1BT0
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BU of 1bt0 by Molmil
STRUCTURE OF UBIQUITIN-LIKE PROTEIN, RUB1
Descriptor: 1,2-ETHANEDIOL, PROTEIN (UBIQUITIN-LIKE PROTEIN 7, RUB1), ...
Authors:Delacruz, W.P, Fisher, A.J.
Deposit date:1998-09-02
Release date:1998-12-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The rub family of ubiquitin-like proteins. Crystal structure of Arabidopsis rub1 and expression of multiple rubs in Arabidopsis.
J.Biol.Chem., 273, 1998
1C3T
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BU of 1c3t by Molmil
ROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURAL SPECIFICITY
Descriptor: PROTEIN (1D8 UBIQUITIN)
Authors:Lazar, G.A, Johnson, E.C, Desjarlais, J.R, Handel, T.M.
Deposit date:1999-07-28
Release date:1999-08-20
Last modified:2018-03-14
Method:SOLUTION NMR
Cite:Rotamer strain as a determinant of protein structural specificity.
Protein Sci., 8, 1999
1D3Z
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BU of 1d3z by Molmil
UBIQUITIN NMR STRUCTURE
Descriptor: PROTEIN (UBIQUITIN)
Authors:Cornilescu, G, Marquardt, J.L, Ottiger, M, Bax, A.
Deposit date:1999-10-01
Release date:1999-10-14
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Validation of Protein Structure from Anisotropic Carbonyl Chemical Shifts in a Dilute Liquid Crystalline Phase
J.Am.Chem.Soc., 120, 1998
1IYF
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BU of 1iyf by Molmil
Solution structure of ubiquitin-like domain of human parkin
Descriptor: parkin
Authors:Sakata, E, Yamaguchi, Y, Kurimoto, E, Kikuchi, J, Yokoyama, S, Kawahara, H, Yokosawa, H, Hattori, N, Mizuno, Y, Tanaka, K, Kato, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-08-13
Release date:2003-03-25
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Parkin binds the Rpn10 subunit of 26S proteasomes through its ubiquitin-like domain
EMBO REP., 4, 2003
1J8C
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BU of 1j8c by Molmil
Solution Structure of the Ubiquitin-like Domain of hPLIC-2
Descriptor: ubiquitin-like protein hPLIC-2
Authors:Walters, K.J, Kleijnen, M.F, Goh, A.M, Wagner, G, Howley, P.M.
Deposit date:2001-05-21
Release date:2002-03-20
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structural studies of the interaction between ubiquitin family proteins and proteasome subunit S5a.
Biochemistry, 41, 2002
1F9J
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BU of 1f9j by Molmil
STRUCTURE OF A NEW CRYSTAL FORM OF TETRAUBIQUITIN
Descriptor: TETRAUBIQUITIN
Authors:Phillips, C.L, Thrower, J, Pickart, C.M, Hill, C.P.
Deposit date:2000-07-10
Release date:2001-02-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of a new crystal form of tetraubiquitin.
Acta Crystallogr.,Sect.D, 57, 2001
1GJZ
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BU of 1gjz by Molmil
Solution structure of a dimeric N-terminal fragment of human ubiquitin
Descriptor: UBIQUITIN
Authors:Bolton, D, Evans, P.A, Stott, K, Broadhurst, R.W.
Deposit date:2001-08-06
Release date:2001-12-13
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure and Properties of a Dimeric N-Terminal Fragment of Human Ubiquitin.
J.Mol.Biol., 314, 2001
1G6J
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BU of 1g6j by Molmil
STRUCTURE OF RECOMBINANT HUMAN UBIQUITIN IN AOT REVERSE MICELLES
Descriptor: UBIQUITIN
Authors:Babu, C.R, Flynn, P.F, Wand, A.J.
Deposit date:2000-11-06
Release date:2001-03-28
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Validation of protein structure from preparations of encapsulated proteins dissolved in low viscosity fluids.
J.Am.Chem.Soc., 123, 2001
1L2N
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BU of 1l2n by Molmil
Smt3 Solution Structure
Descriptor: Ubiquitin-like protein SMT3
Authors:Sheng, W, Liao, X.
Deposit date:2002-02-22
Release date:2002-03-06
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of a yeast ubiquitin-like protein Smt3: the role of structurally less defined sequences in protein-protein recognitions.
Protein Sci., 11, 2002
1M94
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BU of 1m94 by Molmil
Solution Structure of the Yeast Ubiquitin-Like Modifier Protein Hub1
Descriptor: Protein YNR032c-a
Authors:Ramelot, T.A, Cort, J.R, Yee, A.A, Semesi, A, Edwards, A.M, Arrowsmith, C.H, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2002-07-26
Release date:2002-12-11
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution Structure of the Yeast Ubiquitin-Like Modifier Protein Hub1
J.STRUCT.FUNCT.GENOM., 4, 2003
1MG8
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BU of 1mg8 by Molmil
NMR structure of ubiquitin-like domain in murine Parkin
Descriptor: Parkin
Authors:Tashiro, M, Okubo, S, Shimotakahara, S, Hatanaka, H, Yasuda, H, Kainosho, M, Yokoyama, S, Shindo, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-08-15
Release date:2003-04-08
Last modified:2022-12-21
Method:SOLUTION NMR
Cite:NMR structure of ubiquitin-like domain in PARKIN: Gene product of familial Parkinson's disease.
J.Biomol.NMR, 25, 2003
4DWF
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BU of 4dwf by Molmil
Crystal structure of a HLA-B associated transcript 3 (BAT3) from Homo sapiens at 1.80 A resolution
Descriptor: HLA-B-associated transcript 3, SULFATE ION
Authors:Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
Deposit date:2012-02-24
Release date:2012-03-28
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a HLA-B associated transcript 3 (BAT3) from Homo sapiens at 1.80 A resolution
To be published
4S22
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BU of 4s22 by Molmil
Crystal structure of K29 linked di-Ubiquitin
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, IODIDE ION, ...
Authors:Kristariyanto, Y.A, Abdul Rehman, S.A, Campbell, D.G, Morrice, N.A, Johnson, C, Toth, R, Kulathu, Y.
Deposit date:2015-01-17
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:K29-selective ubiquitin binding domain reveals structural basis of specificity and heterotypic nature of k29 polyubiquitin.
Mol.Cell, 58, 2015
4UN2
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BU of 4un2 by Molmil
Crystal structure of the UBA domain of Dsk2 in complex with Ubiquitin
Descriptor: UBIQUITIN, UBIQUITIN DOMAIN-CONTAINING PROTEIN DSK2
Authors:Michielssens, S, Peters, J.H, Ban, D, Pratihar, S, Seeliger, D, Sharma, M, Giller, K, Sabo, T.M, Becker, S, Lee, D, Griesinger, C, de Groot, B.L.
Deposit date:2014-05-23
Release date:2014-08-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:A Designed Conformational Shift to Control Protein Binding Specificity.
Angew.Chem.Int.Ed.Engl., 53, 2014
1NDD
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BU of 1ndd by Molmil
STRUCTURE OF NEDD8
Descriptor: CHLORIDE ION, PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8), SULFATE ION
Authors:Whitby, F.G, Xia, G, Pickart, C.M, Hill, C.P.
Deposit date:1998-08-21
Release date:1999-02-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the human ubiquitin-like protein NEDD8 and interactions with ubiquitin pathway enzymes.
J.Biol.Chem., 273, 1998
1OGW
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BU of 1ogw by Molmil
Synthetic Ubiquitin with fluoro-Leu at 50 and 67
Descriptor: UBIQUITIN
Authors:Alexeev, D, Ramage, R, Young, D.W, Sawyer, L.
Deposit date:2003-05-13
Release date:2003-05-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Synthesis, Structural and Biological Studies of Ubiquitin Mutants Containing (2S, 4S)-5-Fluoroleucine Residues Strategically Placed in the Hydrophobic Core
Chembiochem, 4, 2003
1P1A
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BU of 1p1a by Molmil
NMR structure of ubiquitin-like domain of hHR23B
Descriptor: UV excision repair protein RAD23 homolog B
Authors:Ryu, K.S, Lee, K.J, Bae, S.H, Kim, B.K, Kim, K.A, Choi, B.S.
Deposit date:2003-04-11
Release date:2004-07-13
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Binding surface mapping of intra- and interdomain interactions among hHR23B, ubiquitin, and polyubiquitin binding site 2 of S5a
J.Biol.Chem., 278, 2003
1P98
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BU of 1p98 by Molmil
High-resolution NMR structure of the Ubl-domain of HHR23A
Descriptor: UV excision repair protein RAD23 homolog A
Authors:Mueller, T.D, Feigon, J.
Deposit date:2003-05-09
Release date:2003-10-07
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structural determinants for the binding of ubiquitin-like domains to the proteasome.
Embo J., 22, 2003
1P0R
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BU of 1p0r by Molmil
Solution Structure of UBL5 a human Ubiquitin-Like Protein
Descriptor: ubiquitin-like 5
Authors:McNally, T, Huang, Q, Janis, R.S, Liu, Z, Olejniczak, E.T, Reilly, R.M.
Deposit date:2003-04-10
Release date:2003-10-28
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structural analysis of UBL5, a novel ubiquitin-like modifier
Protein Sci., 12, 2003
1Q5W
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BU of 1q5w by Molmil
Ubiquitin Recognition by Npl4 Zinc-Fingers
Descriptor: Ubiquitin, ZINC ION, homolog of yeast nuclear protein localization 4
Authors:Alam, S.L, Sun, J, Payne, M, Welch, B.D, Blake, B.K, Davis, D.R, Meyer, H.H, Emr, S.D, Sundquist, W.I.
Deposit date:2003-08-11
Release date:2004-03-30
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Ubiquitin interactions of NZF zinc fingers.
Embo J., 23, 2004
1SIF
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BU of 1sif by Molmil
Crystal structure of a multiple hydrophobic core mutant of ubiquitin
Descriptor: ubiquitin
Authors:Benitez-Cardoza, C.G, Stott, K, Hirshberg, M, Went, H.M, Woolfson, D.N, Jackson, S.E.
Deposit date:2004-02-29
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Exploring sequence/folding space: folding studies on multiple hydrophobic core mutants of ubiquitin
Biochemistry, 43, 2004
2W9N
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BU of 2w9n by Molmil
crystal structure of linear di-ubiquitin
Descriptor: CHLORIDE ION, UBIQUITIN, ZINC ION
Authors:Komander, D, Reyes-Turcu, F, Wilkinson, K.D, Barford, D.
Deposit date:2009-01-27
Release date:2009-04-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Molecular Discrimination of Structurally Equivalent Lys 63-Linked and Linear Polyubiquitin Chains.
Embo Rep., 10, 2009
2WX0
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BU of 2wx0 by Molmil
TAB2 NZF DOMAIN IN COMPLEX WITH Lys63-linked di-ubiquitin, P21
Descriptor: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-INTERACTING PROTEIN 2, UBIQUITIN, ZINC ION
Authors:Kulathu, Y, Akutsu, M, Bremm, A, Hofmann, K, Komander, D.
Deposit date:2009-10-30
Release date:2009-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Two-Sided Ubiquitin Binding Explains Specificity of the Tab2 Nzf Domain
Nat.Struct.Mol.Biol., 16, 2009
2WX1
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BU of 2wx1 by Molmil
TAB2 NZF DOMAIN IN COMPLEX WITH Lys63-linked tri-ubiquitin, P212121
Descriptor: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-INTERACTING PROTEIN 2, UBIQUITIN, ZINC ION
Authors:Kulathu, Y, Akutsu, M, Bremm, A, Hofmann, K, Komander, D.
Deposit date:2009-10-30
Release date:2009-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Two-Sided Ubiquitin Binding Explains Specificity of the Tab2 Nzf Domain
Nat.Struct.Mol.Biol., 16, 2009

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