Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4M6D

Crystal structure of the aptamer minF-lysozyme complex.

Experimental procedure
Experimental methodSAD
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2013-01-18
DetectorADSC QUANTUM 315
Wavelength(s)1.075
Spacegroup nameP 1
Unit cell lengths43.914, 132.289, 131.539
Unit cell angles118.59, 96.39, 96.27
Refinement procedure
Resolution38.040 - 2.680
R-factor0.16832
Rwork0.165
R-free0.21600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4m4o
RMSD bond length0.013
RMSD bond angle1.421
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.5.1)
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.750
High resolution limit [Å]2.6807.3202.700
Rmerge0.0670.0370.629
Number of reflections67209
<I/σ(I)>12.1
Completeness [%]94.990.690.9
Redundancy1.91.91.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72981.1M Malonic Acid, 0.15 M Ammonium Citrate Tribasic, 0.072 M Succinic Acid, 0.18 M DL-Malic Acid, 0.24 M Sodium Acetate, 0.3 M Sodium Formate, 0.096 M Ammonium Tartrate Dibasic, Final pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon