PDB keyword search results

3QSB
STRUCTURE OF E. COLI POLIIIBETA WITH (Z)-5-(1-((4'-FLUOROBIPHENYL-4-YL)METHOXYIMINO)BUTYL)-2,2-DIMETHYL-4,6-DIOXOCYCLOHEXANECARBONITRILE
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7)
Authors:Wijffels, G., Johnson, W.M., Oakley, A.J., Turner, K., Epa, V.C., Briscoe, S.J., Polley, M., Liepa, A.J., Hofmann, A., Buchardt, J., Christensen, C., Prosselkov, P., Dalrymple, B.P., Alewood, P.F., Jennings, P.A., Dixon, N.E., Winkler, D.A.
Deposit date:2011-02-20
Release date:2011-06-08
Modification date:2014-03-05
Cite:Binding inhibitors of the bacterial sliding clamp by design
J.Med.Chem., 54, 2011
1JQJ
MECHANISM OF PROCESSIVITY CLAMP OPENING BY THE DELTA SUBUNIT WRENCH OF THE CLAMP LOADER COMPLEX OF E. COLI DNA POLYMERASE III: STRUCTURE OF THE BETA-DELTA COMPLEX
Descriptor:DNA polymerase III, beta chain/DNA polymerase III, delta subunit
Authors:Jeruzalmi, D., Yurieva, O., Zhao, Y., Young, M., Stewart, J., Hingorani, M., O'Donnell, M., Kuriyan, J.
Deposit date:2001-08-07
Release date:2001-11-07
Modification date:2009-02-24
Cite:Mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of E. coli DNA polymerase III.
Cell(Cambridge,Mass.), 106, 2001
1JQL
MECHANISM OF PROCESSIVITY CLAMP OPENING BY THE DELTA SUBUNIT WRENCH OF THE CLAMP LOADER COMPLEX OF E. COLI DNA POLYMERASE III: STRUCTURE OF BETA-DELTA (1-140)
Descriptor:DNA Polymerase III, beta chain (E.C.2.7.7.7)/DNA polymerase III, delta subunit (E.C.2.7.7.7)
Authors:Jeruzalmi, D., Yurieva, O., Zhao, Y., Young, M., Stewart, J., Hingorani, M., O'Donnell, M., Kuriyan, J.
Deposit date:2001-08-07
Release date:2001-09-26
Modification date:2009-02-24
Cite:Mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of E. coli DNA polymerase III.
Cell(Cambridge,Mass.), 106, 2001
1MMI
E. COLI DNA POLYMERASE BETA SUBUNIT
Descriptor:DNA polymerase III, beta chain (E.C.2.7.7.7)
Authors:Oakley, A.J., Prosselkov, P., Wijffels, G., Beck, J.L., Wilce, M.C.J., Dixon, N.E.
Deposit date:2002-09-04
Release date:2003-09-04
Modification date:2009-02-24
Cite:Flexibility revealed by the 1.85 A crystal structure of the beta sliding-clamp subunit of Escherichia coli DNA polymerase III.
Acta Crystallogr.,Sect.D, 59, 2003
1OK7
A CONSERVED PROTEIN BINDING-SITE ON BACTERIAL SLIDING CLAMPS
Descriptor:DNA POLYMERASE III (E.C.2.7.7.7)
Authors:Burnouf, D.Y., Olieric, V., Wagner, J., Fujii, S., Reinbolt, J., Fuchs, R.P.P., Dumas, P.
Deposit date:2003-07-18
Release date:2004-07-15
Modification date:2013-02-13
Cite:Structural and Biochemical Analysis of Sliding Clamp/Ligand Interactions Suggest a Competition between Replicative and Translesion DNA Polymerases
J.Mol.Biol., 335, 2004
1UNN
COMPLEX OF BETA-CLAMP PROCESSIVITY FACTOR AND LITTLE FINGER DOMAIN OF POLIV
Descriptor:DNA POLYMERASE III BETA SUBUNIT (E.C.2.7.7.7), DNA POLYMERASE IV (E.C.2.7.7.7)
Authors:Bunting, K.A., Roe, S.M., Pearl, L.H.
Deposit date:2003-09-11
Release date:2003-11-06
Modification date:2011-07-13
Cite:Structural Basis for Recruitment of Translesion DNA Polymerase Pol Iv/Dinb to the Beta-Clamp
Embo J., 22, 2003
1VPK
CRYSTAL STRUCTURE OF DNA POLYMERASE III, BETA SUBUNIT (TM0262) FROM THERMOTOGA MARITIMA AT 2.00 A RESOLUTION
Descriptor:DNA polymerase III, beta subunit (E.C.2.7.7.7)
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-11-09
Release date:2004-11-23
Modification date:2011-07-13
Cite:Crystal structure of DNA polymerase III, beta subunit (TM0262) from Thermotoga maritima at 2.00 A resolution
To be published
2AVT
CRYSTAL STRUCTURE OF THE BETA SUBUNIT FROM DNA POLYMERASE OF STREPTOCOCCUS PYOGENES
Descriptor:DNA polymerase III beta subunit (E.C.2.7.7.-)
Authors:Argiriadi, M.A., Goedken, E.R., Bruck, I., O'donnell, M., Kuriyan, J.
Deposit date:2005-08-30
Release date:2006-01-24
Modification date:2009-02-24
Cite:Crystal structure of a DNA polymerase sliding clamp from a Gram-positive bacterium.
Bmc Struct.Biol., 6, 2006
2AWA
CRYSTAL STRUCTURE OF DNA POLYMERASE III, BETA CHAIN (EC 2.7.7.7) (NP_344555.1) FROM STREPTOCOCCUS PNEUMONIAE TIGR4 AT 2.50 A RESOLUTION
Descriptor:DNA polymerase III, beta chain (E.C.2.7.7.7)
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-08-31
Release date:2005-09-20
Modification date:2011-07-13
Cite:Crystal structure of DNA polymerase III, beta chain (EC 2.7.7.7) (np_344555.1) from STREPTOCOCCUS PNEUMONIAE TIGR4 at 2.50 A resolution
To be published
2POL
THREE-DIMENSIONAL STRUCTURE OF THE BETA SUBUNIT OF ESCHERICHIA COLI DNA POLYMERASE III HOLOENZYME: A SLIDING DNA CLAMP
Descriptor:POL III (BETA SUBUNIT) (E.C.2.7.7.7)
Authors:Kong, X.-P., Kuriyan, J.
Deposit date:1992-11-13
Release date:1994-01-31
Modification date:2009-02-24
Cite:Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp.
Cell(Cambridge,Mass.), 69, 1992
2XUR
THE G157C MUTATION IN THE ESCHERICHIA COLI SLIDING CLAMP SPECIFICALLY AFFECTS INITIATION OF REPLICATION
Descriptor:DNA POLYMERASE III SUBUNIT BETA (E.C.2.7.7.7)
Authors:Johnsen, L., Morigen, Dalhus, B., Bjoras, M., Flaatten, I., Waldminghaus, T., Skarstad, K.
Deposit date:2010-10-20
Release date:2011-02-16
Cite:The G157C Mutation in the Escherichia Coli Sliding Clamp Specifically Affects Initiation of Replication.
Mol.Microbiol., 79, 2011
3BEP
STRUCTURE OF A SLIDING CLAMP ON DNA
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7)/DNA
Authors:Georgescu, R.E., Kim, S.S., Yurieva, O., Kuriyan, J., Kong, X.-P., O'Donnell, M.
Deposit date:2007-11-19
Release date:2008-01-29
Modification date:2009-02-24
Cite:Structure of a sliding clamp on DNA
Cell(Cambridge,Mass.), 132, 2008
3D1E
CRYSTAL STRUCTURE OF E. COLI SLIDING CLAMP (BETA) BOUND TO A POLYMERASE II PEPTIDE
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7)/14-mer from polymerase II C-terminal
Authors:Georgescu, R.E., Yurieva, O., Seung-Sup, K., Kuriyan, J., Kong, X-P., O'Donnell, M.
Deposit date:2008-05-05
Release date:2008-07-29
Modification date:2009-06-09
Cite:Structure of a small-molecule inhibitor of a DNA polymerase sliding clamp.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3D1F
CRYSTAL STRUCTURE OF E. COLI SLIDING CLAMP (BETA) BOUND TO A POLYMERASE III PEPTIDE
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7)/nonapeptidefrom polymerase III C-terminal
Authors:Georgescu, R.E., Yurieva, O., Seung-Sup, K., Kuriyan, J., Kong, X-P., O'Donnell, M.
Deposit date:2008-05-05
Release date:2008-07-29
Modification date:2009-06-09
Cite:Structure of a small-molecule inhibitor of a DNA polymerase sliding clamp.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3D1G
STRUCTURE OF A SMALL MOLECULE INHIBITOR BOUND TO A DNA SLIDING CLAMP
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7)
Authors:Georgescu, R.E., Yurieva, O., Seung-Sup, K., Kuriyan, J., Kong, X-P., O'Donnell, M.
Deposit date:2008-05-05
Release date:2008-07-29
Modification date:2009-06-09
Cite:Structure of a small-molecule inhibitor of a DNA polymerase sliding clamp.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3F1V
E. COLI BETA SLIDING CLAMP, 148-153 ALA MUTANT
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7)
Authors:Cody, V.
Deposit date:2008-10-28
Release date:2009-09-01
Modification date:2011-03-09
Cite:Sliding clamp-DNA interactions are required for viability and contribute to DNA polymerase management in Escherichia coli.
J.Mol.Biol., 387, 2009
3P16
CRYSTAL STRUCTURE OF DNA POLYMERASE III SLIDING CLAMP
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7)
Authors:Gui, W.J., Lin, S.Q., Chen, Y.Y., Zhang, X.E., Bi, L.J., Jiang, T.
Deposit date:2010-09-30
Release date:2011-08-24
Cite:Crystal structure of DNA polymerase III beta sliding clamp from Mycobacterium tuberculosis.
Biochem.Biophys.Res.Commun., 405, 2011
3PWE
CRYSTAL STRUCTURE OF THE E. COLI BETA CLAMP MUTANT R103C, I305C, C260S, C333S AT 2.2A RESOLUTION
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7)
Authors:Marzahn, M.R., Robbins, A.H., McKenna, R., Bloom, L.B.
Deposit date:2010-12-08
Release date:2011-10-19
Modification date:2013-06-26
Cite:The E. coli clamp loader can actively pry open the beta-sliding clamp
J.Biol.Chem., 286, 2011
3Q4J
STRUCTURE OF A SMALL PEPTIDE LIGAND BOUND TO E.COLI DNA SLIDING CLAMP
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7), peptide ligand
Authors:Wolff, P., Olieric, V., Briand, J.P., Chaloin, O., Dejaegere, A., Dumas, P., Ennifar, E., Guichard, G., Wagner, J., Burnouf, D.
Deposit date:2010-12-23
Release date:2011-12-28
Modification date:2013-03-20
Cite:Structure-based design of short peptide ligands binding onto the E. coli processivity ring.
J.Med.Chem., 54, 2011
3Q4K
STRUCTURE OF A SMALL PEPTIDE LIGAND BOUND TO E.COLI DNA SLIDING CLAMP
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7), peptide ligand
Authors:Wolff, P., Olieric, V., Briand, J.P., Chaloin, O., Dejaegere, A., Dumas, P., Ennifar, E., Guichard, G., Wagner, J., Burnouf, D.
Deposit date:2010-12-23
Release date:2011-12-28
Modification date:2013-03-20
Cite:Structure-based design of short peptide ligands binding onto the E. coli processivity ring.
J.Med.Chem., 54, 2011
3Q4L
STRUCTURE OF A SMALL PEPTIDE LIGAND BOUND TO E.COLI DNA SLIDING CLAMP
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7), peptide ligand
Authors:Wolff, P., Olieric, V., Briand, J.P., Chaloin, O., Dejaegere, A., Dumas, P., Ennifar, E., Guichard, G., Wagner, J., Burnouf, D.
Deposit date:2010-12-23
Release date:2011-12-28
Modification date:2013-03-20
Cite:Structure-based design of short peptide ligands binding onto the E. coli processivity ring.
J.Med.Chem., 54, 2011
3RB9
CRYSTAL STRUCTURE OF THE M. TUBERCULOSIS BETA CLAMP
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7)
Authors:Kukshal, V., Ramachandran, R.
Deposit date:2011-03-29
Release date:2012-04-04
Modification date:2013-02-06
Cite:M. tuberculosis Sliding beta-Clamp Does Not Interact Directly with the NAD(+)-Dependent DNA Ligase
Plos One, 7, 2012
3T0P
CRYSTAL STRUCTURE OF A PUTATIVE DNA POLYMERASE III BETA SUBUNIT (EUBREC_0002; ERE_29750) FROM EUBACTERIUM RECTALE ATCC 33656 AT 2.26 A RESOLUTION
Descriptor:DNA polymerase III, beta subunit
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-07-20
Release date:2011-08-10
Cite:Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution
To be published
4K3K
E. COLI SLIDING CLAMP IN COMPLEX WITH (S)-2-(4-METHYLPENTANAMIDO)-3-PHENYLPROPANOIC ACID
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7)
Authors:Yin, Z., Oakley, A.J.
Deposit date:2013-04-10
Release date:2013-05-01
Modification date:2014-01-15
Cite:Structural and Thermodynamic Dissection of Linear Motif Recognition by the E. coli Sliding Clamp
J.Med.Chem., 56, 2013
4K3L
E. COLI SLIDING CLAMP IN COMPLEX WITH ACLF DIPEPTIDE
Descriptor:DNA polymerase III subunit beta (E.C.2.7.7.7)
Authors:Yin, Z., Oakley, A.J.
Deposit date:2013-04-10
Release date:2013-05-01
Modification date:2014-01-15
Cite:Structural and Thermodynamic Dissection of Linear Motif Recognition by the E. coli Sliding Clamp
J.Med.Chem., 56, 2013
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