PDB keyword search results

1JE8
TWO-COMPONENT RESPONSE REGULATOR NARL/DNA COMPLEX: DNA BENDING FOUND IN A HIGH AFFINITY SITE
Descriptor:NARL/DNA Complex
Authors:Maris, A.E., Sawaya, M.R., Kaczor-Grzeskowiak, M., Jarvis, M.R., Bearson, S.M.D., Kopka, M.L., Schroder, I., Gunsalus, R.P., Dickerson, R.E.
Deposit date:2001-06-15
Release date:2002-09-27
Modification date:2009-02-24
Cite:Dimerization allows DNA target site recognition by the NarL response regulator.
Nat.Struct.Biol., 9, 2002
1ZG1
NARL COMPLEXED TO NIRB PROMOTER NON-PALINDROMIC TAIL-TO-TAIL DNA SITE
Descriptor:Nitrate/nitrite response regulator protein narL/DNA Complex
Authors:Maris, A.E., Kaczor-Grzeskowiak, M., Ma, Z., Kopka, M.L., Gunsalus, R.P., Dickerson, R.E.
Deposit date:2005-04-20
Release date:2005-11-22
Modification date:2009-02-24
Cite:Primary and Secondary Modes of DNA Recognition by the NarL Two-Component Response Regulator.
Biochemistry, 44, 2005
1ZG5
NARL COMPLEXED TO NARG-89 PROMOTER PALINDROMIC TAIL-TO-TAIL DNA SITE
Descriptor:Nitrate/nitrite response regulator protein narL/DNA Complex
Authors:Maris, A.E., Kaczor-Grzeskowiak, M., Ma, Z., Kopka, M.L., Gunsalus, R.P., Dickerson, R.E.
Deposit date:2005-04-20
Release date:2005-11-22
Modification date:2009-02-24
Cite:Primary and Secondary Modes of DNA Recognition by the NarL Two-Component Response Regulator.
Biochemistry, 44, 2005
1ZLJ
CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS HYPOXIC RESPONSE REGULATOR DOSR C-TERMINAL DOMAIN
Descriptor:Dormancy Survival Regulator
Authors:Wisedchaisri, G., Wu, M., Rice, A.E., Roberts, D.M., Sherman, D.R., Hol, W.G.J.
Deposit date:2005-05-06
Release date:2006-01-31
Modification date:2009-02-24
Cite:Structures of Mycobacterium tuberculosis DosR and DosR-DNA complex involved in gene activation during adaptation to hypoxic latency.
J.Mol.Biol., 354, 2005
1ZLK
CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS HYPOXIC RESPONSE REGULATOR DOSR C-TERMINAL DOMAIN-DNA COMPLEX
Descriptor:Dormancy Survival Regulator/DNA Complex
Authors:Wisedchaisri, G., Wu, M., Rice, A.E., Roberts, D.M., Sherman, D.R., Hol, W.G.J.
Deposit date:2005-05-06
Release date:2006-01-31
Modification date:2009-02-24
Cite:Structures of Mycobacterium tuberculosis DosR and DosR-DNA complex involved in gene activation during adaptation to hypoxic latency.
J.Mol.Biol., 354, 2005
2JPC
SSRB DNA BINDING PROTEIN
Descriptor:SsrB
Authors:Liao, X., Kenney, L., Sheng, W., Integrated Center for Structure and Function Innovation (ISFI)
Deposit date:2007-05-03
Release date:2007-07-03
Modification date:2009-02-24
Cite:SSRB DNA Binding Protein
To be Published
2KRF
NMR SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF COMPETENCE PROTEIN A
Descriptor:Transcriptional regulatory protein comA
Authors:Hobbs, C.A., Bobay, B.G., Thompson, R.J., Perego, M., Cavanagh, J.
Deposit date:2009-12-16
Release date:2010-04-07
Modification date:2010-05-05
Cite:NMR solution structure and DNA-binding model of the DNA-binding domain of competence protein A.
J.Mol.Biol., 398, 2010
3C57
CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS HYPOXIC RESPONSE REGULATOR DOSR C-TERMINAL DOMAIN CRYSTAL FORM II
Descriptor:TWO COMPONENT TRANSCRIPTIONAL REGULATORY PROTEIN DEVR
Authors:Wisedchaisri, G., Wu, M., Sherman, D.R., Hol, W.G.J.
Deposit date:2008-01-30
Release date:2008-04-22
Modification date:2011-07-13
Cite:Crystal structures of the response regulator DosR from Mycobacterium tuberculosis suggest a helix rearrangement mechanism for phosphorylation activation
J.Mol.Biol., 378, 2008
1FSE
CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS REGULATORY PROTEIN GERE
Descriptor:THE BACILLUS SUBTILIS REGULATORY PROTEIN GERE
Authors:Ducros, V.M.-A., Lewis, R.J., Verma, C.S., Dodson, E.J., Leonard, G., Turkenburg, J.P., Murshudov, G.N., Wilkinson, A.J., Brannigan, J.A.
Deposit date:2000-09-08
Release date:2001-03-21
Modification date:2011-07-13
Cite:Crystal structure of GerE, the ultimate transcriptional regulator of spore formation in Bacillus subtilis.
J.Mol.Biol., 306, 2001
1P4W
SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF THE ERWINIA AMYLOVORA RCSB PROTEIN
Descriptor:rcsB
Authors:Pristovsek, P., Sengupta, K., Loehr, F., Schaefer, B., Wehland von Trebra, M., Rueterjans, H., Bernhard, F.
Deposit date:2003-04-24
Release date:2003-06-17
Modification date:2009-02-24
Cite:Structural analysis of the DNA-binding domain of the Erwinia amylovora RcsB protein and its interaction with the RcsAB box.
J.Biol.Chem., 278, 2003
3CLO
CRYSTAL STRUCTURE OF PUTATIVE TRANSCRIPTIONAL REGULATOR CONTAINING A LUXR DNA BINDING DOMAIN (NP_811094.1) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 2.04 A RESOLUTION
Descriptor:Transcriptional regulator
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-03-19
Release date:2008-04-01
Modification date:2011-07-13
Cite:Crystal structure of putative transcriptional regulator containing a LuxR DNA binding domain (NP_811094.1) from Bacteroides thetaiotaomicron VPI-5482 at 2.04 A resolution
To be published
1A04
THE STRUCTURE OF THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL IN THE MONOCLINIC C2 CRYSTAL FORM
Descriptor:NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL
Authors:Baikalov, I., Schroder, I., Kaczor-Grzeskowiak, M., Cascio, D., Gunsalus, R.P., Dickerson, R.E.
Deposit date:1997-12-08
Release date:1998-03-18
Modification date:2009-02-24
Cite:NarL dimerization? Suggestive evidence from a new crystal form
Biochemistry, 37, 1998
1H0M
THREE-DIMENSIONAL STRUCTURE OF THE QUORUM SENSING PROTEIN TRAR BOUND TO ITS AUTOINDUCER AND TO ITS TARGET DNA
Descriptor:TRANSCRIPTIONAL ACTIVATOR PROTEIN TRAR
Authors:Vannini, A., Volpari, C., Gargioli, C., Muraglia, E., Cortese, R., De Francesco, R., Neddermann, P., Di Marco, S.
Deposit date:2002-06-25
Release date:2002-08-29
Modification date:2009-02-24
Cite:The Crystal Structure of the Quorum Sensing Protein Trar Bound to its Autoinducer and Target DNA
Embo J., 21, 2002
1L3L
CRYSTAL STRUCTURE OF A BACTERIAL QUORUM-SENSING TRANSCRIPTION FACTOR COMPLEXED WITH PHEROMONE AND DNA
Descriptor:Transcriptional activator protein traR/DNA Complex
Authors:Zhang, R., Pappas, T., Brace, J.L., Miller, P.C., Oulmassov, T., Molyneaux, J.M., Anderson, J.C., Bashkin, J.K., Winans, S.C., Joachimiak, A.
Deposit date:2002-02-27
Release date:2002-07-03
Modification date:2009-02-24
Cite:Structure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA.
Nature, 417, 2002
1RNL
THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL FROM NARL
Descriptor:NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL
Authors:Baikalov, I., Schroder, I., Kaczor-Grzeskowiak, M., Grzeskowiak, K., Gunsalus, R.P., Dickerson, R.E.
Deposit date:1996-04-17
Release date:1996-11-08
Modification date:2011-07-13
Cite:Structure of the Escherichia coli response regulator NarL.
Biochemistry, 35, 1996
1X3U
SOLUTION STRUCTURE OF THE C-TERMINAL TRANSCRIPTIONAL ACTIVATOR DOMAIN OF FIXJ FROM SINORHIZOBIUM MELILOT
Descriptor:Transcriptional regulatory protein fixJ
Authors:Kurashima-Ito, K., Kasai, Y., Hosono, K., Tamura, K., Oue, S., Isogai, M., Ito, Y., Nakamura, H., Shiro, Y.
Deposit date:2005-05-10
Release date:2006-05-02
Modification date:2009-02-24
Cite:Solution structure of the C-terminal transcriptional activator domain of FixJ from Sinorhizobium meliloti and its recognition of the fixK promoter
Biochemistry, 44, 2005
1YIO
CRYSTALLOGRAPHIC STRUCTURE OF RESPONSE REGULATOR STYR FROM PSEUDOMONAS FLUORESCENS
Descriptor:response regulator StyR
Authors:Milani, M., Leoni, L., Rampioni, G., Zennaro, E., Ascenzi, P., Bolognesi, M.
Deposit date:2005-01-12
Release date:2005-09-27
Modification date:2009-02-24
Cite:An Active-like Structure in the Unphosphorylated StyR Response Regulator Suggests a Phosphorylation- Dependent Allosteric Activation Mechanism
STRUCTURE, 13, 2005
1ZN2
LOW RESOLUTION STRUCTURE OF RESPONSE REGULATOR STYR
Descriptor:response regulatory protein
Authors:Milani, M., Leoni, L., Rampioni, G., Zennaro, E., Ascenzi, P., Bolognesi, M.
Deposit date:2005-05-11
Release date:2005-09-27
Modification date:2009-02-24
Cite:An Active-like Structure in the Unphosphorylated StyR Response Regulator Suggests a Phosphorylation- Dependent Allosteric Activation Mechanism.
STRUCTURE, 13, 2005
2Q0O
CRYSTAL STRUCTURE OF AN ANTI-ACTIVATION COMPLEX IN BACTERIAL QUORUM SENSING
Descriptor:quorum sensing transcription factor TraR, quorum sensing anti-activator TraM
Authors:Chen, G., Jeffrey, P.D., Fuqua, C., Shi, Y., Chen, L.
Deposit date:2007-05-22
Release date:2007-09-25
Modification date:2011-07-13
Cite:Structural basis for antiactivation in bacterial quorum sensing.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2RNJ
NMR STRUCTURE OF THE S. AUREUS VRAR DNA BINDING DOMAIN
Descriptor:Response regulator protein vraR
Authors:Donaldson, L.W.
Deposit date:2008-01-09
Release date:2008-01-22
Modification date:2009-02-24
Cite:The NMR Structure of the Staphylococcus aureus Response Regulator VraR DNA Binding Domain Reveals a Dynamic Relationship between It and Its Associated Receiver Domain
Biochemistry, 47, 2008
3C3W
CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS HYPOXIC RESPONSE REGULATOR DOSR
Descriptor:TWO COMPONENT TRANSCRIPTIONAL REGULATORY PROTEIN DEVR
Authors:Wisedchaisri, G., Wu, M., Sherman, D.R., Hol, W.G.J.
Deposit date:2008-01-28
Release date:2008-04-22
Modification date:2011-07-13
Cite:Crystal structures of the response regulator DosR from Mycobacterium tuberculosis suggest a helix rearrangement mechanism for phosphorylation activation
J.Mol.Biol., 378, 2008
3KLN
VIBRIO CHOLERAE VPST
Descriptor:Transcriptional regulator, LuxR family
Authors:Krasteva, P.V., Navarro, V.A.S., Sondermann, H.
Deposit date:2009-11-08
Release date:2010-02-09
Modification date:2010-03-02
Cite:Vibrio cholerae VpsT Regulates Matrix Production and Motility by Directly Sensing Cyclic di-GMP.
Science, 327, 2010
3KLO
VIBRIO CHOLERAE VPST BOUND TO C-DI-GMP
Descriptor:Transcriptional regulator VpsT
Authors:Krasteva, P.V., Navarro, V.A.S., Sondermann, H.
Deposit date:2009-11-08
Release date:2010-02-09
Modification date:2010-03-02
Cite:Vibrio cholerae VpsT Regulates Matrix Production and Motility by Directly Sensing Cyclic di-GMP.
Science, 327, 2010
3MZY
THE CRYSTAL STRUCTURE OF THE RNA POLYMERASE SIGMA-H FACTOR FROM FUSOBACTERIUM NUCLEATUM TO 2.5A
Descriptor:RNA polymerase sigma-H factor
Authors:Stein, A.J., Chhor, G., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-05-13
Release date:2010-06-02
Cite:The Crystal Structure of the RNA polymerase sigma-H factor from Fusobacterium nucleatum to 2.5A
To be Published
3P7N
CRYSTAL STRUCTURE OF LIGHT ACTIVATED TRANSCRIPTION FACTOR EL222 FROM ERYTHROBACTER LITORALIS
Descriptor:Sensor histidine kinase
Authors:McNulty, R., Luecke, H.
Deposit date:2010-10-12
Release date:2011-05-25
Modification date:2011-06-29
Cite:Structural basis of photosensitivity in a bacterial light-oxygen-voltage/helix-turn-helix (LOV-HTH) DNA-binding protein.
Proc.Natl.Acad.Sci.USA, 108, 2011
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