PDB keyword search results

10MH
TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND HEMIMETHYLATED DNA CONTAINING 5,6-DIHYDRO-5-AZACYTOSINE AT THE TARGET
Descriptor:CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/DNA COMPLEX
Authors:Sheikhnejad, G., Brank, A., Christman, J.K., Goddard, A., Alvarez, E., Ford Junior, H., Marquez, V.E., Marasco, C.J., Sufrin, J.R., O'Gara, M., Cheng, X.
Deposit date:1998-08-10
Release date:1999-02-09
Modification date:2009-02-24
Cite:Mechanism of inhibition of DNA (cytosine C5)-methyltransferases by oligodeoxyribonucleotides containing 5,6-dihydro-5-azacytosine.
J.Mol.Biol., 285, 1999
1DCT
DNA (CYTOSINE-5) METHYLASE FROM HAEIII COVALENTLY BOUND TO DNA
Descriptor:MODIFICATION METHYLASE HAEIII (E.C.2.1.1.73)/DNA COMPLEX
Authors:Reinisch, K.M., Chen, L., Verdine, G.L., Lipscomb, W.N.
Deposit date:1995-05-17
Release date:1995-09-15
Modification date:2009-02-24
Cite:The crystal structure of HaeIII methyltransferase convalently complexed to DNA: an extrahelical cytosine and rearranged base pairing.
Cell(Cambridge,Mass.), 82, 1995
1FJX
STRUCTURE OF TERNARY COMPLEX OF HHAI METHYLTRANSFERASE MUTANT (T250G) IN COMPLEX WITH DNA AND ADOHCY
Descriptor:HHAI METHYLTRANSFERASE MUTANT (T250G) (E.C. 2.1.1.73), DNA AND ADOHCY
Authors:Vilkaitis, G., Dong, A., Weinhold, E., Cheng, X., Klimasauskas, S.
Deposit date:2000-08-08
Release date:2000-12-15
Modification date:2009-02-24
Cite:Functional roles of the conserved threonine 250 in the target recognition domain of HhaI DNA methyltransferase.
J.Biol.Chem., 275, 2000
1G55
STRUCTURE OF HUMAN DNMT2, AN ENIGMATIC DNA METHYLTRANSFERASE HOMOLOGUE
Descriptor:DNA CYTOSINE METHYLTRANSFERASE DNMT2 (E.C.2.1.1.37)
Authors:Dong, A., Yoder, J.A., Zhang, X., Zhou, L., Bestor, T.H., Cheng, X.
Deposit date:2000-10-30
Release date:2001-01-17
Modification date:2011-07-13
Cite:Structure of human DNMT2, an enigmatic DNA methyltransferase homolog that displays denaturant-resistant binding to DNA.
Nucleic Acids Res., 29, 2001
1HMY
CRYSTAL STRUCTURE OF THE HHAI DNA METHYLTRANSFERASE COMPLEXED WITH S-ADENOSYL-L-METHIONINE
Descriptor:HHAI DNA (CYTOSINE-C5-)-METHYLTRANSFERASE (E.C.2.1.1.37) COMPLEX WITH S-ADENOSYL-L-METHIONINE
Authors:Cheng, X.
Deposit date:1993-08-05
Release date:1993-10-31
Modification date:2012-02-01
Cite:Crystal structure of the HhaI DNA methyltransferase complexed with S-adenosyl-L-methionine.
Cell(Cambridge,Mass.), 74, 1993
1M0E
ZEBULARINE: A NOVEL DNA METHYLATION INHIBITOR THAT FORMS A COVALENT COMPLEX WITH DNA METHYLTRANSFERASE
Descriptor:Modification methylase HhaI/DNA Complex
Authors:Zhou, L., Cheng, X., Connolly, B.A., Dickman, M.J., Hurd, P.J., Hornby, D.P.
Deposit date:2002-06-12
Release date:2002-09-18
Modification date:2009-02-24
Cite:ZEBULARINE: A NOVEL DNA METHYLATION INHIBITOR THAT FORMS A COVALENT COMPLEX WITH DNA METHYLTRANSFERASES
J.MOL.BIOL., 321, 2002
1MHT
COVALENT TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE, DNA AND S-ADENOSYL-L-HOMOCYSTEINE
Descriptor:HHAI METHYLTRANSFERASE (E.C.2.1.1.73)/DNA COMPLEX + S-ADENOSYL-L- HOMOSYTEINE
Authors:Cheng, X.
Deposit date:1994-12-08
Release date:1995-06-03
Modification date:2009-02-24
Cite:HhaI methyltransferase flips its target base out of the DNA helix.
Cell(Cambridge,Mass.), 76, 1994
1SKM
HHAI METHYLTRANSFERASE IN COMPLEX WITH DNA CONTAINING AN ABASIC SOUTH CARBOCYCLIC SUGAR AT ITS TARGET SITE
Descriptor:Modification methylase HhaI /5'-D(*TP*CP*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3' /5'-D(*T*GP*TP*CP*AP*GP*(HCX)P*GP*CP*AP*TP*GP*G)-3'
Authors:Horton, J.R., Ratner, G., Banavali, N., Huang, N., Marquez, V.E., MacKerell, A.D., Cheng, X.
Deposit date:2004-03-05
Release date:2004-08-24
Modification date:2009-02-24
Cite:Caught in the act: visualization of an intermediate in the DNA base-flipping pathway induced by HhaI methyltransferase
Nucleic Acids Res., 32, 2004
1SVU
STRUCTURE OF THE Q237W MUTANT OF HHAI DNA METHYLTRANSFERASE: AN INSIGHT INTO PROTEIN-PROTEIN INTERACTIONS
Descriptor:Modification methylase HhaI (E.C.2.1.1.37)
Authors:Dong, A., Zhou, L., Zhang, X., Stickel, S., Roberts, R.J., Cheng, X.
Deposit date:2004-03-30
Release date:2004-06-29
Modification date:2009-02-24
Cite:Structure of the Q237W mutant of HhaI DNA methyltransferase: an insight into protein-protein interactions
Biol.Chem., 385, 2004
2HMY
BINARY COMPLEX OF HHAI METHYLTRANSFERASE WITH ADOMET FORMED IN THE PRESENCE OF A SHORT NONPSECIFIC DNA OLIGONUCLEOTIDE
Descriptor:CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI
Authors:O'Gara, M., Zhang, X., Roberts, R.J., Cheng, X.
Deposit date:1999-02-08
Release date:1999-03-19
Modification date:2009-02-24
Cite:Structure of a binary complex of HhaI methyltransferase with S-adenosyl-L-methionine formed in the presence of a short non-specific DNA oligonucleotide.
J.Mol.Biol., 287, 1999
2HR1
TERNARY STRUCTURE OF WT M.HHAI C5-CYTOSINE DNA METHYLTRANSFERASE WITH UNMODIFIED DNA AND ADOHCY
Descriptor:Transferase/DNA Complex
Authors:Shieh, F.
Deposit date:2006-07-19
Release date:2006-09-19
Modification date:2009-02-24
Cite:The Role of Arg165 Towards Base Flipping, Base Stabilization and Catalysis in M.HhaI.
J.Mol.Biol., 362, 2006
2I9K
ENGINEERED EXTRAHELICAL BASE DESTABILIZATION ENHANCES SEQUENCE DISCRIMINATION OF DNA METHYLTRANSFERASE M.HHAI
Descriptor:Modification methylase HhaI/DNA Complex, S-Adenosyl-L-Homocysteine
Authors:Youngblood, B., Shieh, F.K., De Los Rios, S., Perona, J.J., Reich, N.O.
Deposit date:2006-09-05
Release date:2006-10-10
Modification date:2009-02-24
Cite:Engineered Extrahelical Base Destabilization Enhances Sequence Discrimination of DNA Methyltransferase M.HhaI
J.Mol.Biol., 362, 2006
2Z6A
S-ADENOSYL-L-METHIONINE-DEPENDENT METHYL TRANSFER: OBSERVABLE PRECATALYTIC INTERMEDIATES DURING DNA CYTOSINE METHYLATION
Descriptor:Transferase(E.C.2.1.1.37)/DNA Complex
Authors:Shieh, F.K.
Deposit date:2007-07-25
Release date:2007-08-21
Modification date:2009-02-24
Cite:S-Adenosyl-l-methionine-Dependent Methyl Transfer: Observable Precatalytic Intermediates during DNA Cytosine Methylation
Biochemistry, 46, 2007
2Z6Q
TERNARY STRUCTURE OF ARG165ALA M.HHAI C5-CYTOSINE DNA METHYLTRANSFERASE WITH UNMODIFIED DNA AND ADOHCY
Descriptor:Modification methylase HhaI(E.C.2.1.1.37)/DNA Complex
Authors:Shieh, F.K.
Deposit date:2007-08-08
Release date:2007-08-28
Modification date:2009-02-24
Cite:The role of Arg165 towards base flipping, base stabilization and catalysis in M.HhaI
J.Mol.Biol., 362, 2006
2Z6U
TERNARY STRUCTURE OF THE GLU119ALA M.HHAI, C5-CYTOSINE DNA METHYLTRANSFERASE, WITH UNMODIFIED DNA AND ADOHCY
Descriptor:Transferase(E.C.2.1.1.37)/DNA Complex
Authors:Shieh, F.K.
Deposit date:2007-08-09
Release date:2007-11-20
Modification date:2009-02-24
Cite:AdoMet-dependent Methyl-transfer: Glu(119) Is Essential for DNA C5-Cytosine Methyltransferase M.HhaI
J.Mol.Biol., 373, 2007
2ZCJ
TERNARY STRUCTURE OF THE GLU119GLN M.HHAI, C5-CYTOSINE DNA METHYLTRANSFERASE, WITH UNMODIFIED DNA AND ADOHCY
Descriptor:Modification methylase HhaI(E.C.2.1.1.37)/DNA Complex
Authors:Shieh, F.K., Reich, N.O.
Deposit date:2007-11-09
Release date:2007-12-04
Modification date:2009-02-24
Cite:AdoMet-dependent Methyl-transfer: Glu(119) Is Essential for DNA C5-Cytosine Methyltransferase M.HhaI
J.Mol.Biol., 373, 2007
3EEO
M. HHAI CO-CRYSTALLIZED WITH SYNTHETIC DSDNA CONTAINING A PROPANE DIOL IN PLACE OF THE DEOXYCYTIDINE RESIDUE TARGETED FOR METHYLATION.
Descriptor:Modification methylase HhaI (E.C.2.1.1.37)/DNA Complex
Authors:Porta, J.C., Christman, J.K., Borgstahl, G.E.O.
Deposit date:2008-09-05
Release date:2010-03-02
Cite:M. HhaI co-crystallized with synthetic dsDNA containing a propane diol in place of the deoxycytidine residue targeted for methylation.
To be Published
3G7U
CRYSTAL STRUCTURE OF PUTATIVE DNA MODIFICATION METHYLTRANSFERASE ENCODED WITHIN PROPHAGE CP-933R (E.COLI)
Descriptor:Cytosine-specific methyltransferase (E.C.2.1.1.37)
Authors:Patskovsky, Y., Ramagopal, U.A., Toro, R., Gilmore, M., Iizuka, M., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-10
Release date:2009-02-24
Modification date:2011-07-13
Cite:Crystal Structure of DNA Modification Methyltransferase Encoded within Prophage Cp-933R (E.coli)
To be Published
3LX6
CRYSTAL STRUCTURE OF PUTATIVE DNA CYTOSINE METHYLASE FROM SHIGELLA FLEXNERI 2A STR. 2457T
Descriptor:Cytosine-specific methyltransferase (E.C.2.1.1.37)
Authors:Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-02-24
Release date:2010-03-23
Modification date:2012-05-23
Cite:Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
To be Published
3ME5
CRYSTAL STRUCTURE OF PUTATIVE DNA CYTOSINE METHYLASE FROM SHIGELLA FLEXNERI 2A STR. 2457T
Descriptor:Cytosine-specific methyltransferase (E.C.2.1.1.37)
Authors:Ramagopal, U.A., Malashkevich, V.N., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-03-31
Release date:2010-04-21
Modification date:2012-05-23
Cite:Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
To be Published
3MHT
TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH UNMODIFIED DNA AND ADOHCY
Descriptor:URACIL-DNA GLYCOSYLASE (E.C.2.1.1.73)/DNA COMPLEX + S-ADENOSYL-L-HOMOCYSTEINE
Authors:O'Gara, M., Klimasauskas, S., Roberts, R.J., Cheng, X.
Deposit date:1996-07-24
Release date:1997-01-27
Modification date:2009-02-24
Cite:Enzymatic C5-cytosine methylation of DNA: mechanistic implications of new crystal structures for HhaL methyltransferase-DNA-AdoHcy complexes.
J.Mol.Biol., 261, 1996
3QV2
STRUCTURE ANALYSIS OF ENTAMOEBA HISTOLYTICA METHYLTRANSFERASE EHMETH
Descriptor:5-cytosine DNA methyltransferase (E.C.2.1.1.37)
Authors:Schulz, E.C., Roth, H.M., Ankri, S., Ficner, R.
Deposit date:2011-02-25
Release date:2012-04-11
Cite:Crystal Structure Analysis of Entamoeba histolytica Methyltransferase
To be Published
4DKJ
CPG SPECIFIC METHYLTRANSFERASE IN COMPLEX WITH TARGET DNA
Descriptor:Cytosine-specific methyltransferase (E.C.2.1.1.37)
Authors:Wojciechowski, M., Czapinska, H., Bochtler, M.
Deposit date:2012-02-03
Release date:2012-12-05
Modification date:2013-01-16
Cite:CpG underrepresentation and the bacterial CpG-specific DNA methyltransferase M.MpeI.
Proc.Natl.Acad.Sci.USA, 110, 2013
4H0N
CRYSTAL STRUCTURE OF SPODOPTERA FRUGIPERDA DNMT2 E260A/E261A/K263A MUTANT
Descriptor:DNMT2 (E.C.2.1.1.-)
Authors:Li, S., Du, J., Yang, H., Yin, J., Zhong, J., Ding, J.
Deposit date:2012-09-09
Release date:2012-11-14
Modification date:2013-02-27
Cite:Functional and structural characterization of DNMT2 from Spodoptera frugiperda.
J Mol Cell Biol, 5, 2013
4MHT
TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH NATIVE DNA AND ADOHCY
Descriptor:HHAI METHYLTRANSFERASE (E.C.2.1.1.73)/DNA COMPLEX + S-ADENOSYL-L-HOMOSYTEINE
Authors:Cheng, X.
Deposit date:1996-07-24
Release date:1997-01-27
Modification date:2009-02-24
Cite:Enzymatic C5-cytosine methylation of DNA: mechanistic implications of new crystal structures for HhaL methyltransferase-DNA-AdoHcy complexes.
J.Mol.Biol., 261, 1996
<12>
Loading...
Loading