Find the service you need

Choose a keyword listed below or input keywords into the textbox at the right of the keyword list. The brief explanation of the matched services will be displayed.
  • Click the 'Show all services' button to display the explanation for all services.
  • Input some keywords into the 'Word Search Box' to narrow down the search results.
Show all services

Latest news

News on 2016-12-9
The PDBj news and Molecule of the Month are available via RSS feeds.
News on 2016-10-15
Remediation of 3DEM Entries in the Protein Data Bank (wwPDB News)
News on 2016-10-1
AutoDep, ADIT-NMR and EMDep Deposition Systems Have Been Retired, Effective September 30th 2016 (wwPDB News)
News on 2016-8-31
On 15th Sep 2016, the development versions of EM Navigator and Yorodumi will replace the official versions.
See this page for details. News, Aug 31, 2016 - Yorodumi Docs
News on 2016-8-29
A paper regarding Molmil, a molecular viewer developed by PDBj, has been published.
All news

Guide for first time visitors

For an introduction to the new web interface, please read Using PDBj's web interface. An introduction to the customization features offered by the new PDBj web interface can be found here. To get a more in-depth explanation on the various features of the PDBj website, please take a look at the Interactive tutorial series.
To further improve our new web page, any comments and suggestions are welcome. The legacy PDBj website continues to be available at

PDBj service suspension due to system maintenance

From 11:30 p.m. to 0:00(midnight) on Sunday, December 11th (JST), OneDep deposition service at PDBj will not be available for updates to enable HTTPS("secure") access. We apologize for the inconvenience.
PDBj@FacebookPDBj@TwitterwwPDBwwPDB FoundationEM DataBank

Copyright © 2013-2016 Protein Data Bank Japan
Latest new entries