Pairwise fitting pdb-4v5m on pdb-4v74 by gmfit



Pairwise fitting of target pdb-4v5m on reference pdb-4v74 by gmfit(PID:1650713).

RANK[1] Corr.Coeff:0.936 [JSmol] [Molmil]
TARGET(pdb-4v5m)
display:
color:
[Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-4v5m)]
REFERENCE(pdb-4v74)
display:
color:
[Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.936 0.817 0.787 0.785 0.762 0.756 0.756 0.751 0.745 0.729

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4v74"(PDB-format) or "4v74"(mmCIF-format), and read it.
  2. Download the Target molecule "4v5m"(PDB-format) or "4v5m"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.775710,-0.152688,0.612340 136.798525 center 0,0,0 model #1
    move 176.910081,178.546094,192.870095 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!