Pairwise fitting pdb-4v5m on pdb-4v72 by gmfit










Pairwise fitting of target pdb-4v5m on reference pdb-4v72 by gmfit(PID:3491643).





RANK[1] Corr.Coeff:0.950

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v5m)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v5m)]







REFERENCE(pdb-4v72)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.950
0.823
0.801
0.799
0.770
0.766
0.762
0.750
0.741
0.741







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v72"(PDB-format) or 
 "4v72"(mmCIF-format), and read it.

  2.  Download the Target molecule "4v5m"(PDB-format) or
  "4v5m"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.755036,-0.171950,0.632735 136.760456 center 0,0,0 model #1
move 176.827970,176.105076,190.592765 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!