Pairwise fitting pdb-4v5m on pdb-4v61 by gmfit










Pairwise fitting of target pdb-4v5m on reference pdb-4v61 by gmfit(PID:4137230).





RANK[1] Corr.Coeff:0.924

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v5m)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v5m)]







REFERENCE(pdb-4v61)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.924
0.810
0.779
0.766
0.741
0.729
0.726
0.717
0.711
0.700







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v61"(PDB-format) or 
 "4v61"(mmCIF-format), and read it.

  2.  Download the Target molecule "4v5m"(PDB-format) or
  "4v5m"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.486992,-0.787377,0.377989 8.818849 center 0,0,0 model #1
move -5.657181,0.237532,6.472245 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!