Pairwise fitting pdb-4v5m on emdb-2773 by gmfit



Pairwise fitting of target pdb-4v5m on reference emdb-2773 by gmfit(PID:1227656).

RANK[1] Corr.Coeff:0.885 [JSmol] [Molmil]
TARGET(pdb-4v5m)
display:
color:
[Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-4v5m)]
REFERENCE(emdb-2773)
display:
color:
Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.885 0.744 0.734 0.696 0.688 0.678 0.668 0.664 0.661 0.655

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2773.map.gz", and read it.
  2. Download the Target molecule "4v5m"(PDB-format) or "4v5m"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.718948,0.691505,-0.070247 178.357243 center 0,0,0 model #1
    move -0.131744,0.231662,1.207867 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!