Pairwise fitting pdb-4v5m on emdb-2183 by gmfit










Pairwise fitting of target pdb-4v5m on reference emdb-2183 by gmfit(PID:4068576).





RANK[1] Corr.Coeff:0.815

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v5m)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v5m)]







REFERENCE(emdb-2183)

display:



color:


Structural basis for TetM-mediated tetracycline resistance [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.815
0.763
0.758
0.757
0.747
0.733
0.723
0.720
0.719
0.717







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2183.map.gz", and read it.

  2.  Download the Target molecule "4v5m"(PDB-format) or
  "4v5m"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.146300,-0.107886,-0.983340 178.254526 center 0,0,0 model #1
move -2.945551,3.419937,-1.452113 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!