Pairwise fitting pdb-4v5m on emdb-2009 by gmfit










Pairwise fitting of target pdb-4v5m on reference emdb-2009 by gmfit(PID:4017672).





RANK[1] Corr.Coeff:0.809

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v5m)

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 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v5m)]







REFERENCE(emdb-2009)

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3D reconstruction of an archaeal 70S ribosome in complex with aPelota and aABCE1 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.809
0.789
0.788
0.771
0.749
0.748
0.747
0.747
0.745
0.743







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2009.map.gz", and read it.

  2.  Download the Target molecule "4v5m"(PDB-format) or
  "4v5m"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.170084,0.151819,0.973665 174.957321 center 0,0,0 model #1
move -2.716077,4.295261,0.461180 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!