Pairwise fitting pdb-4v4v on emdb-2183 by gmfit










Pairwise fitting of target pdb-4v4v on reference emdb-2183 by gmfit(PID:2508356).





RANK[1] Corr.Coeff:0.796

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v4v)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v4v)]







REFERENCE(emdb-2183)

display:



color:


Structural basis for TetM-mediated tetracycline resistance [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.796
0.770
0.735
0.733
0.731
0.731
0.725
0.723
0.718
0.708







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2183.map.gz", and read it.

  2.  Download the Target molecule "4v4v"(PDB-format) or
  "4v4v"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.020721,0.056399,0.998193 177.668950 center 0,0,0 model #1
move -8.862458,5.607028,-0.710922 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!