Pairwise fitting pdb-4v47 on pdb-3j78 by gmfit



Pairwise fitting of target pdb-4v47 on reference pdb-3j78 by gmfit(PID:3631045).

RANK[1] Corr.Coeff:0.883 [JSmol] [Molmil]
TARGET(pdb-4v47)
display:
color:
[Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-4v47)]
REFERENCE(pdb-3j78)
display:
color:
[Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.883 0.771 0.762 0.752 0.739 0.732 0.730 0.717 0.716 0.708

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3j78"(PDB-format) or "3j78"(mmCIF-format), and read it.
  2. Download the Target molecule "4v47"(PDB-format) or "4v47"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.052209,-0.032026,0.998123 88.615370 center 0,0,0 model #1
    move 192.270889,185.058843,195.213796 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!