Pairwise fitting pdb-4v47 on emdb-2599 by gmfit










Pairwise fitting of target pdb-4v47 on reference emdb-2599 by gmfit(PID:3529001).





RANK[1] Corr.Coeff:0.886

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v47)

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color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v47)]







REFERENCE(emdb-2599)

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Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.886
0.763
0.760
0.746
0.744
0.741
0.737
0.736
0.726
0.726







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2599.map.gz", and read it.

  2.  Download the Target molecule "4v47"(PDB-format) or
  "4v47"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.063923,-0.880190,-0.470297 18.420865 center 0,0,0 model #1
move 226.023047,208.745033,222.974408 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!