Pairwise fitting pdb-4v47 on emdb-2172 by gmfit



Pairwise fitting of target pdb-4v47 on reference emdb-2172 by gmfit(PID:1282946).

RANK[1] Corr.Coeff:0.294 [JSmol] [Molmil]
TARGET(pdb-4v47)
display:
color:
[Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-4v47)]
REFERENCE(emdb-2172)
display:
color:
Methanococcus igneus 70S ribosome [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.294 0.251 0.250 0.243 0.233 0.200 0.196 0.192 0.191 0.188

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2172.map.gz", and read it.
  2. Download the Target molecule "4v47"(PDB-format) or "4v47"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.044334,0.588657,-0.807166 76.471471 center 0,0,0 model #1
    move -20.039581,98.118380,33.275011 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!