Pairwise fitting pdb-4v47 on emdb-2010 by gmfit










Pairwise fitting of target pdb-4v47 on reference emdb-2010 by gmfit(PID:4073634).





RANK[1] Corr.Coeff:0.789

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v47)

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 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v47)]







REFERENCE(emdb-2010)

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3D reconstruction of a translating yeast 80S ribosome in complex with Dom34p and Rli1p [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.789
0.771
0.708
0.707
0.707
0.690
0.680
0.679
0.678
0.666







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2010.map.gz", and read it.

  2.  Download the Target molecule "4v47"(PDB-format) or
  "4v47"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.623336,0.739400,0.254441 141.108564 center 0,0,0 model #1
move -3.563565,4.201922,-5.665164 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!