Pairwise fitting pdb-4v47 on emdb-1616 by gmfit










Pairwise fitting of target pdb-4v47 on reference emdb-1616 by gmfit(PID:4074740).





RANK[1] Corr.Coeff:0.852

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v47)

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 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v47)]







REFERENCE(emdb-1616)

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Three-dimensional structure of Oxa1 bound to the translating ribosome [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.852
0.681
0.680
0.660
0.660
0.654
0.646
0.645
0.628
0.622







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1616.map.gz", and read it.

  2.  Download the Target molecule "4v47"(PDB-format) or
  "4v47"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.999322,0.016190,-0.033059 178.647740 center 0,0,0 model #1
move 2.083429,-2.247115,3.539814 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!