Pairwise fitting pdb-3j0f on pdb-3bbx by gmfit










Pairwise fitting of target pdb-3j0f on reference pdb-3bbx by gmfit(PID:2336144).





RANK[1] Corr.Coeff:0.502

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3j0f)

display:



color:



b'SINDBIS VIRION                                                        ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3j0f)]







REFERENCE(pdb-3bbx)

display:



color:


b'THE HSP15 PROTEIN FITTED INTO THE LOW RESOLUTION CRYO-EM MAP OF THE   ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.502
0.470
0.470
0.469
0.466
0.461
0.456
0.443
0.432
0.425







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3bbx"(PDB-format) or 
 "3bbx"(mmCIF-format), and read it.

  2.  Download the Target molecule "3j0f"(PDB-format) or
  "3j0f"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.592929,0.780713,-0.197288 91.616672 center 0,0,0 model #1
move -360.886710,-253.118111,-52.049459 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!