Pairwise fitting pdb-3j0f on pdb-1z8y by gmfit










Pairwise fitting of target pdb-3j0f on reference pdb-1z8y by gmfit(PID:4119802).





RANK[1] Corr.Coeff:0.663

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3j0f)

display:



color:



b'SINDBIS VIRION                                                        ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3j0f)]







REFERENCE(pdb-1z8y)

display:



color:


b'MAPPING THE E2 GLYCOPROTEIN OF ALPHAVIRUSES                           ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.663
0.295
0.278
0.277
0.253
0.234
0.231
0.217
0.214
0.214







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1z8y"(PDB-format) or 
 "1z8y"(mmCIF-format), and read it.

  2.  Download the Target molecule "3j0f"(PDB-format) or
  "3j0f"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.229336,-0.228544,-0.946136 156.883796 center 0,0,0 model #1
move -2.779599,-5.770150,-6.429806 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!