Pairwise fitting pdb-3j0f on emdb-2762 by gmfit










Pairwise fitting of target pdb-3j0f on reference emdb-2762 by gmfit(PID:523981).





RANK[1] Corr.Coeff:0.470

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3j0f)

display:



color:



b'SINDBIS VIRION                                                        ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3j0f)]







REFERENCE(emdb-2762)

display:



color:


Electron cryo-microscopy of human mitochondrial large ribosomal subunit [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.470
0.460
0.448
0.447
0.442
0.440
0.439
0.434
0.432
0.428







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2762.map.gz", and read it.

  2.  Download the Target molecule "3j0f"(PDB-format) or
  "3j0f"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.548207,0.196291,0.812981 177.734676 center 0,0,0 model #1
move -21.777827,227.102291,79.147078 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!