Pairwise fitting pdb-3j0f on emdb-2367 by gmfit










Pairwise fitting of target pdb-3j0f on reference emdb-2367 by gmfit(PID:3689753).





RANK[1] Corr.Coeff:0.434

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3j0f)

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b'SINDBIS VIRION                                                        ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3j0f)]







REFERENCE(emdb-2367)

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Structural mimicry in transcription regulation of human RNA polymerase II by the DNA helicase RECQL5 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.434
0.403
0.336
0.334
0.323
0.312
0.308
0.305
0.302
0.294







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2367.map.gz", and read it.

  2.  Download the Target molecule "3j0f"(PDB-format) or
  "3j0f"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.679500,0.733194,-0.026596 160.362807 center 0,0,0 model #1
move 89.853589,206.395311,442.382930 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!