Pairwise fitting pdb-3izd on pdb-2w4h by gmfit










Pairwise fitting of target pdb-3izd on reference pdb-2w4h by gmfit(PID:4109521).





RANK[1] Corr.Coeff:0.413

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3izd)

display:



color:



b'MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3izd)]







REFERENCE(pdb-2w4h)

display:



color:


b'ISOMETRICALLY CONTRACTING INSECT ASYNCHRONOUS FLIGHT MUSCLE QUICK     ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.413
0.352
0.351
0.315
0.315
0.313
0.161
0.141
0.138
0.111







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2w4h"(PDB-format) or 
 "2w4h"(mmCIF-format), and read it.

  2.  Download the Target molecule "3izd"(PDB-format) or
  "3izd"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.009163,0.820823,-0.571110 98.978568 center 0,0,0 model #1
move -127.514051,41.736689,92.818753 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!