Pairwise fitting pdb-3gzu on emdb-6150 by gmfit



Pairwise fitting of target pdb-3gzu on reference emdb-6150 by gmfit(PID:2118798).

RANK[1] Corr.Coeff:0.433 [JSmol] [Molmil]
TARGET(pdb-3gzu)
display:
color:
b'VP7 RECOATED ROTAVIRUS DLP ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-3gzu)]
REFERENCE(emdb-6150)
display:
color:
Structures of Protective Antibodies Reveal Sites of Vulnerability on Ebola Virus [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.433 0.379 0.378 0.376 0.366 0.346 0.346 0.343 0.343 0.338

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_6150.map.gz", and read it.
  2. Download the Target molecule "3gzu"(PDB-format) or "3gzu"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.356229,0.608639,-0.708985 164.266211 center 0,0,0 model #1
    move 168.522300,397.501488,323.043099 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!