Pairwise fitting pdb-3gzu on emdb-5024 by gmfit










Pairwise fitting of target pdb-3gzu on reference emdb-5024 by gmfit(PID:3819806).





RANK[1] Corr.Coeff:0.625

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3gzu)

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b'VP7 RECOATED ROTAVIRUS DLP                                            ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3gzu)]







REFERENCE(emdb-5024)

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Cryo-EM structure of Pyrococcus furiosus in apo-state [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.625
0.570
0.565
0.553
0.526
0.522
0.519
0.517
0.514
0.502







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5024.map.gz", and read it.

  2.  Download the Target molecule "3gzu"(PDB-format) or
  "3gzu"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.188814,-0.928651,0.319307 121.744278 center 0,0,0 model #1
move 496.633493,146.423232,255.308963 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!