Pairwise fitting pdb-3gzu on emdb-1239 by gmfit



Pairwise fitting of target pdb-3gzu on reference emdb-1239 by gmfit(PID:1547291).

RANK[1] Corr.Coeff:0.115 [JSmol] [Molmil]
TARGET(pdb-3gzu)
display:
color:
b'VP7 RECOATED ROTAVIRUS DLP ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-3gzu)]
REFERENCE(emdb-1239)
display:
color:
Infectious bursal disease virus capsid assembly and maturation by structural rearrangements of a transient molecular switch. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1239.map.gz", and read it.
  2. Download the Target molecule "3gzu"(PDB-format) or "3gzu"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.198704,-0.877298,0.436882 56.126994 center 0,0,0 model #1
    move 372.155411,7.655361,464.765306 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!