Pairwise fitting pdb-2zz9 on pdb-5me2 by gmfit










Pairwise fitting of target pdb-2zz9 on reference pdb-5me2 by gmfit(PID:55691).





RANK[1] Corr.Coeff:0.559

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(pdb-5me2)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.559
0.554
0.542
0.539
0.532
0.525
0.522
0.510
0.507
0.496







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5me2"(PDB-format) or 
 "5me2"(mmCIF-format), and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.606996,-0.298838,-0.736377 159.290434 center 0,0,0 model #1
move -75.827139,-1.212280,10.904603 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!