Pairwise fitting pdb-2zz9 on pdb-5k0z by gmfit










Pairwise fitting of target pdb-2zz9 on reference pdb-5k0z by gmfit(PID:3510094).





RANK[1] Corr.Coeff:0.426

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(pdb-5k0z)

display:



color:


b'CRYO-EM STRUCTURE OF LACTATE DEHYDROGENASE (LDH) IN INHIBITOR-BOUND   ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.426
0.414
0.411
0.411
0.404
0.404
0.403
0.402
0.401
0.401







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5k0z"(PDB-format) or 
 "5k0z"(mmCIF-format), and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.985103,0.137240,-0.103624 89.129901 center 0,0,0 model #1
move 11.192332,179.608104,3.012306 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!