Pairwise fitting pdb-2zz9 on pdb-5abb by gmfit










Pairwise fitting of target pdb-2zz9 on reference pdb-5abb by gmfit(PID:3668978).





RANK[1] Corr.Coeff:0.449

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(pdb-5abb)

display:



color:


b'VISUALIZATION OF A POLYTOPIC MEMBRANE PROTEIN DURING SECY-MEDIATED    ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.449
0.413
0.403
0.401
0.397
0.396
0.389
0.380
0.376
0.370







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5abb"(PDB-format) or 
 "5abb"(mmCIF-format), and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.702730,0.128348,-0.699784 112.081990 center 0,0,0 model #1
move -13.284978,-30.506841,-2.710338 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!