Pairwise fitting pdb-2zz9 on pdb-4arg by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-4arg by gmfit(PID:2284572).

RANK[1] Corr.Coeff:0.530 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-4arg)
display:
color:
b'STRUCTURE OF THE IMMATURE RETROVIRAL CAPSID AT 8A RESOLUTION BY CRYO- ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.530 0.517 0.490 0.475 0.458 0.445 0.444 0.434 0.428 0.373

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4arg"(PDB-format) or "4arg"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.055590,0.304049,0.951033 138.678898 center 0,0,0 model #1
    move 72.438876,-11.153175,-75.908080 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!