Pairwise fitting pdb-2zz9 on pdb-3zee by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-3zee by gmfit(PID:1178000).

RANK[1] Corr.Coeff:0.549 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-3zee)
display:
color:
b'ELECTRON CYRO-MICROSCOPY HELICAL RECONSTRUCTION OF PAR-3 N TERMINAL ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.549 0.538 0.530 0.524 0.520 0.520 0.513 0.512 0.508 0.500

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3zee"(PDB-format) or "3zee"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.468339,0.393675,-0.790998 35.153843 center 0,0,0 model #1
    move -30.690707,33.286927,-152.325329 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!