Pairwise fitting pdb-2zz9 on pdb-3j3z by gmfit










Pairwise fitting of target pdb-2zz9 on reference pdb-3j3z by gmfit(PID:3997941).





RANK[1] Corr.Coeff:0.513

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(pdb-3j3z)

display:



color:


b'STRUCTURE OF MA28-7 NEUTRALIZING ANTIBODY FAB FRAGMENT FROM ELECTRON  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.513
0.495
0.494
0.491
0.483
0.483
0.477
0.460
0.460
0.419







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j3z"(PDB-format) or 
 "3j3z"(mmCIF-format), and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.978570,-0.037507,-0.202469 154.164772 center 0,0,0 model #1
move -66.378083,-20.070217,311.765518 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!