Pairwise fitting pdb-2zz9 on pdb-3iy6 by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-3iy6 by gmfit(PID:1123542).

RANK[1] Corr.Coeff:0.684 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-3iy6)
display:
color:
b'VARIABLE DOMAINS OF THE COMPUTER GENERATED MODEL (WAM) OF FAB E FITTED' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.684 0.678 0.670 0.669 0.659 0.657 0.654 0.643 0.642 0.633

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3iy6"(PDB-format) or "3iy6"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.479291,-0.794755,0.372350 177.939630 center 0,0,0 model #1
    move 48.851644,29.922967,242.135884 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!