Pairwise fitting pdb-2zz9 on pdb-3iy0 by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-3iy0 by gmfit(PID:3810633).

RANK[1] Corr.Coeff:0.709 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-3iy0)
display:
color:
b'VARIABLE DOMAINS OF THE X-RAY STRUCTURE OF FAB 14 FITTED ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.709 0.687 0.685 0.667 0.666 0.656 0.645 0.624 0.620 0.617

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3iy0"(PDB-format) or "3iy0"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.878764,-0.391421,-0.273062 67.471651 center 0,0,0 model #1
    move 81.869153,57.190328,43.167291 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!