Pairwise fitting pdb-2zz9 on pdb-3bbu by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-3bbu by gmfit(PID:1423063).

RANK[1] Corr.Coeff:0.599 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-3bbu)
display:
color:
b'THE HSP15 PROTEIN FITTED INTO THE LOW RESOLUTION CRYO-EM MAP OF THE ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.599 0.598 0.576 0.565 0.557 0.551 0.550 0.548 0.546 0.531

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3bbu"(PDB-format) or "3bbu"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.559718,-0.828682,-0.001228 59.558258 center 0,0,0 model #1
    move -123.358859,-247.929421,-220.398459 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!