Pairwise fitting pdb-2zz9 on pdb-3b8k by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-3b8k by gmfit(PID:1532650).

RANK[1] Corr.Coeff:0.646 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-3b8k)
display:
color:
b'STRUCTURE OF THE TRUNCATED HUMAN DIHYDROLIPOYL ACETYLTRANSFERASE (E2) ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.646 0.626 0.622 0.611 0.605 0.604 0.590 0.582 0.570 0.565

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3b8k"(PDB-format) or "3b8k"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.971567,-0.202973,0.121897 157.324051 center 0,0,0 model #1
    move 70.186234,13.186307,212.163901 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!