Pairwise fitting pdb-2zz9 on pdb-1r2x by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-1r2x by gmfit(PID:1548355).

RANK[1] Corr.Coeff:0.635 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-1r2x)
display:
color:
b'COORDINATES OF L11 WITH 58NTS OF 23S RRNA FITTED INTO THE CRYO-EM MAP ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.635 0.631 0.617 0.602 0.587 0.585 0.584 0.584 0.572 0.572

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "1r2x"(PDB-format) or "1r2x"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.962019,0.056396,-0.267094 113.329854 center 0,0,0 model #1
    move -31.493504,147.373462,-69.797344 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!