Pairwise fitting pdb-2zz9 on pdb-1ih5 by gmfit










Pairwise fitting of target pdb-2zz9 on reference pdb-1ih5 by gmfit(PID:3675113).





RANK[1] Corr.Coeff:0.847

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(pdb-1ih5)

display:



color:


b'CRYSTAL STRUCTURE OF AQUAPORIN-1                                      ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.847
0.701
0.642
0.631
0.613
0.611
0.605
0.601
0.598
0.584







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1ih5"(PDB-format) or 
 "1ih5"(mmCIF-format), and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.470150,0.882427,0.016793 178.282973 center 0,0,0 model #1
move 16.467815,-20.669285,131.560577 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!