Pairwise fitting pdb-2zz9 on emdb-6333 by gmfit










Pairwise fitting of target pdb-2zz9 on reference emdb-6333 by gmfit(PID:34714).





RANK[1] Corr.Coeff:0.386

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(emdb-6333)

display:



color:


Structure of DEC205 at acidic pH [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.386
0.358
0.355
0.340
0.298
0.287
0.259
0.247
0.236
0.230







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6333.map.gz", and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.064955,-0.073910,0.995147 173.002280 center 0,0,0 model #1
move 22.443307,61.676709,-138.465348 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!