Pairwise fitting pdb-2zz9 on emdb-5766 by gmfit










Pairwise fitting of target pdb-2zz9 on reference emdb-5766 by gmfit(PID:3969936).





RANK[1] Corr.Coeff:0.643

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

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b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(emdb-5766)

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A new topology of the HK97-like fold revealed in Bordetella bacteriophage by cryoEM at 3.5A resolution [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.643
0.609
0.601
0.601
0.597
0.585
0.561
0.556
0.552
0.544







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5766.map.gz", and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.581758,0.202122,-0.787848 126.281754 center 0,0,0 model #1
move -143.134894,18.383631,254.819591 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!